Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0835 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGCGGCAGATACTCCACCGTTTACAAGGGCAGGAAGAAGAAGACTATTGAGTATTTCGCCATCAAAAGCGTCGATAAATCGCAGAAAACTAAGGTCCTTGAAGAAGTCAGGATTCTTCACACATTGGATCATGCAAATGTGCTGAAGTTTTACGACTGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTAGAGTACTGTGTTGGAGGGGATCTGCTTTCCATATTACGACAGGATAGTCAACTTCCTGAAGATTCGGTTCATGGTTTTGCTTATAATCTAGTCAAAGCTTTGCAGTTTTTACATTCAAATGAAATAATATATTGTGACCTGAAACCTTCAAACATCCTACTAGATGAAAACGGATGTGCAAAGCTATGTGATTTTGGATTGGCGAGGAAGTTGAAAGATATATCAAAAGCTCCTTCTTCCTCGTTACCGCGAGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCACTAGGCTGTGTACTATATGAATGCTATGCTGGGAGGCCACCCTTTGTGGGAAGAGAATTCACCCAGCTTGTAAAATCCATCATTTCAGATCCGACTCCACCTCTCCCTGGTAATCCAAGTCGGCCTTTTGTCAATTTAATTAATTCCCTGTTGGTAAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTTTGGAGAACCAAATTTACTCTGTTGCCTCTGCCTGCTCAACCTGCCTTTGATGATATGATAGAGCTACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAATCTTCGCATAACAGGACCCCTACCAAATATCGTGAAAAAGATGTCAAAGGGGCGTTGAGAAAGGATGAGAACTCTGTTTTAGGATCTAGAGGCATTGAGACACCAGCAAGGGCAACACCAATTGGCCACAGAACTCAGACAAAGGGTTCTGGCAGAATACATGAGGTAAAGCAAAAAGATAATTCTAACATTAGCAAGGGTGTGAATCTTTTGAGACTGTCAAGAATAGCAAAAACAAATTTACAGAGAGAAAATGAGAAGGAAAACTATCGACGCCCCTTGCCTAATAACTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAACGAGAATACTGAAGATGATGCGCATGAAGAAACTGATGGCACCGAACAAACAACTCCTGTGCCTGATGAGAAAACAGACAATCATTTTCTGAACCAGGGAAAAGCAGAGGAGATTGAAAATAATACACACCAGTTGGACACCCCATCTGTTGTTCACCCTCCAGTCTCGGATGACCCAAGGTCATTTGATCATGAATCAACTCCTGACCTTCCTGACATATCTGCTATTTCTCCCAGTGTGAGCCCTCAGGTGAAGAAGCATAGAACTAAAGAAGACGCAGGATCAGGCCTTGACTTCGATTCTTCAAGGTTGTCTAACAACCTTTCCCAGGTTCTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCTAGCAGAAAAATTGATAAAGCCTCAGAAGTCATTCCTTCACTCCCTTTTGAGGCATTGCAAGCATCTGATTTTGTCAAGATGCCCAAAGAGAAATTGGAGGCAATCCACAACCGAATATTATCCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTACCTTGAGATGTTGAGCAGTAATGCTGATGCAGCTAATATCTTGACCAATGGGCCAATAATGCTCATGCTTGTAAAATTGCAGCGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATTGGTCTGTTGATTAGGCACTCCACCTTTGTTGATGACAGTTTGGCTAGTTCTGGAATTTTAGGTGCACTGACTGATGGCCTTAGAGACAGGCAGGAAAAAGTAAGGAGGTTCTCCATGGCTGCTTTGGGTGAGTTACTATTTTATATATCCACTCAAAATGCGGACTGCAGGGATAACAATCAACTTGAATCTCCATCAAAGGACAATAGGACTACACATGGCTGGCAGGTTCCAAATTCATTAATATCACTTGTGTCATCAATGTTGCGGAAGGGAGAGGATGATATAACTCAATTGTATGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGTTCCTGGGTGGGGCGTTTGTCCAGTCAATATGTTATTAGTAATCTCTGCTATATCTATAGGGCCTCAGGGAAACAAGAGAGTATGAGGCTCACTGCAGGATCATGCTTGGTGCGCTTAGTTCGTTTTAATCCTCCTAGCATTCAGTTGGTTATTGAGAAGCTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAGGGCAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATGGCAATGCTTGGAAGTCACATGTTCACAAATATTGGAAGATGCCTTGTATCACTTGCTGAGGATAAAAATCTGATCCCAAGTCTTTTGGGTCTTGTCGAGCAAGGTAGTGAAGTTTTAAGAGGAAAGGCACTAGTCCTTGTGGCCCTCCTCTGTAAGCATGGCAGGAGGTGGCTTCCACACTTCTTTTGTAGCCAAAAGTTACTCTCTGTGGTGGATAGGTTGGGAAAAGAGAAGGATGCTTATGTGAGGCAGTGTTTGGATGCATTTGTGCATATTGTGGCATCCAGTATTCCAGGTTTATTGGATATAATAACAGGGGATGTCCAGCAAATGATGGGAGGAAGGCGCCAAGGACACATCTCTGCCCTTACCAGCAGATCTGCCCCAAAAACCAGCATTCATTTGTTTCCTGTTGTCCTTCATCTTCTTGGAACTTCTACTTTTAAGCACAAAGTAGTCACACCGCAAGTCTTACGGCAGTTAGCGAATTTAATTAAACTCGTGGAGACACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTCGAGTCTCTCACAGAGGAATCTCCTGTGATTCTTGGTAATCCTGACATTTTCATACGTGAAATCCTCCCTAGTTCGACAGTTCTCTACAAGGGGAACAAGGACGGTGATGCCAGATTTTTGTGCCTTAAAATTCTTTTTGATGTGATGATCATTCTTTTGAGTGAACCAATTGAAGAAGAGCATAGATTGAAGGATCTGAAATTCGTATCAAATACCCATTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATCTATGCACAGAAGCTTCTTGTCATGCTAATGGAGTTCAGTTTTATTACAATTCCTGACATTCTACATCTGAAGACAATTTCACAATGCTTTGAGTTCTTGCTGGGTGATCTCTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTCTGGCTTCTGCTCCTGAGATGGAGTCCAAATTACTCTCTCAGTTAAAGGTGGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTATATGCAAAGGGTATGGAAGATTTGCTGGATCCAACTCTTGGGCTGTGTAAGGCTTTTCTAGCACGTTCAGTCAGCTGCACAAAAGGCTTCAGCTACACAACAGAACCAATTCTCTTAGGTGACTGTCCTCCTGAGTTGAGTGGTGGTGCTGTTGATCCCCAGCAATGCATAAAAGATATAGCAGACTTTGGAAGCAATGTCGGTGTCTTACTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCTGATATAGCTTCTGAATGTGTTGTCTTACTGCTCAAGGCAGCTCCTAGAGAAGCCACGACTGGTATACTAACCAATCTCCCCAAGGTGACTGTGATCCTAGAGAGCTGGAATAGAGGCATTCCTCACTTGATGGTCCAGCGAATGCTTCACGCTTTAGGTTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTATCAATATCCAAACCTGAGATTTCAAGAACTGAAGTCATAGTTTCTGAACTCAAAAGTTCAGGTGGATCAGCTTTAGCCAAAACAGCTGGGCTGGCAGCCTTGGAATTGCAGCGGTTGCCTCGCTGCATTTGA 4116 0.4271 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHANVLKFYDWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVHGFAYNLVKALQFLHSNEIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKAPSSSLPRAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWRTKFTLLPLPAQPAFDDMIELHAKPCLSERNGDKSSHNRTPTKYREKDVKGALRKDENSVLGSRGIETPARATPIGHRTQTKGSGRIHEVKQKDNSNISKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENTEDDAHEETDGTEQTTPVPDEKTDNHFLNQGKAEEIENNTHQLDTPSVVHPPVSDDPRSFDHESTPDLPDISAISPSVSPQVKKHRTKEDAGSGLDFDSSRLSNNLSQVLWHPSDLSVRPVMPSRKIDKASEVIPSLPFEALQASDFVKMPKEKLEAIHNRILSILNGNTSIGEKQNVIRYLEMLSSNADAANILTNGPIMLMLVKLQRQSKASALRVQLASLIGLLIRHSTFVDDSLASSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRTTHGWQVPNSLISLVSSMLRKGEDDITQLYALRTIENICSQGGSWVGRLSSQYVISNLCYIYRASGKQESMRLTAGSCLVRLVRFNPPSIQLVIEKLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMFTNIGRCLVSLAEDKNLIPSLLGLVEQGSEVLRGKALVLVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDAYVRQCLDAFVHIVASSIPGLLDIITGDVQQMMGGRRQGHISALTSRSAPKTSIHLFPVVLHLLGTSTFKHKVVTPQVLRQLANLIKLVETPFQGRDDFQITLLRIFESLTEESPVILGNPDIFIREILPSSTVLYKGNKDGDARFLCLKILFDVMIILLSEPIEEEHRLKDLKFVSNTHFLPLYPTLIEDEDPIPIYAQKLLVMLMEFSFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVYAKGMEDLLDPTLGLCKAFLARSVSCTKGFSYTTEPILLGDCPPELSGGAVDPQQCIKDIADFGSNVGVLLELSASAETSIADIASECVVLLLKAAPREATTGILTNLPKVTVILESWNRGIPHLMVQRMLHALGYACKQYLLHAMILSISKPEISRTEVIVSELKSSGGSALAKTAGLAALELQRLPRCI* 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0835 1371 CDD STKc_ULK4 3 257 - -
Gso15g0835 1371 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0835 1371 Gene3D Transferase(Phosphotransferase) domain 1 1 311 - -
Gso15g0835 1371 MobiDBLite consensus disorder prediction 411 434 - -
Gso15g0835 1371 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0835 1371 MobiDBLite consensus disorder prediction 285 355 - -
Gso15g0835 1371 MobiDBLite consensus disorder prediction 419 434 - -
Gso15g0835 1371 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gso15g0835 1371 Gene3D - 559 918 IPR011989 -
Gso15g0835 1371 MobiDBLite consensus disorder prediction 285 318 - -
Gso15g0835 1371 SUPERFAMILY ARM repeat 571 921 IPR016024 -
Gso15g0835 1371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Gso15g0835 1371 MobiDBLite consensus disorder prediction 373 397 - -
Gso15g0835 1371 MobiDBLite consensus disorder prediction 446 508 - -
Gso15g0835 1371 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0835 1371 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1368 IPR044591 GO:0000911|GO:0000914|GO:0008017
Gso15g0835 1371 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0835 Gso-Chr15 7664860 7672427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0835 1 246 AGC Kinase Gene Family AT1G45160 34.058 5.86e-37 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Gso15g0835 Pkinase 3.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0835 K17545 - gmx:100817590 2704.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0835 15 7664860 7672427 Gso11g2437 11 40378382 40385081 GST