Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0817 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGGCAGTGGTGGGGTGAGGGTCAAGGAGGTGCCCAACAGAGATTCTTCTTTTAAGGAAGCTGCTGCTTCTGTTGTTCCTCAGTCTCACCACCCCAGCAGGGTTAATTCAGATAAATCAAAATCACGAAGTGGCGCAGATACTAAGAAGGAAACACCAGTTCCAAAGGATGGCCCAACGGCCCATATTGCTGCACAAACATTTACGTTCCGAGAACTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGTTTATTAGGCGAAGGAGGTTTCGGGCGTGTTTACAAAGGTCGCCTTGAGACCACAGGACAAGTGGTTGCTGTAAAACAGCTTGACCGAAATGGTCTTCAAGGAAATCGAGAGTTTTTGGTGGAAGTTCTTATGCTCAGTCTCTTGCATCATCCAAATCTTGTGAACTTAATTGGCTATTGTGCTGATGGTGATCAGCGGCTGCTTGTTTATGAATTTATGCCATTGGGATCTTTGGAGGATCATTTACACGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAACACTAGGATGAAAATAGCAGCTGGAGCTGCAAAGGGATTGGAATATTTGCATGACAAGGCAAATCCGCCAGTGATATATAGAGACTTAAAATCATCCAACATCCTCCTTGATGAGGGTTATCATCCCAAGTTATCAGATTTTGGGCTGGCAAAACTTGGTCCAGTCGGCGACAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGTCAACTAACTCTGAAATCTGATGTCTATAGTTTTGGTGTTGTCTTCCTTGAACTCATTACTGGGCGCAAGGCTATTGATAACACCCGTGCACATGGAGAGCATAATCTTGTTGCATGGGCACGGCCGCTTTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCTGACCCTCTACTTCAAGGCCGTTACCCGATGCGAGGACTATACCAAGCACTTGCAGTTGCTGCAATGTGTCTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTGGTGACTGCTCTCACATATCTGGCTTCACAGACATATGATCCAAATGCAGCCAATCAATCCAACAGGGTTGGTCCATCAACCCCTAGGAGCAGGGATGACAGAAGGAGCATGGCAGACAGTGTGGACAGCCCCGACCATGGCCGGCTCGGCTCCCCTTCCACCCACAGAAATTCACCCGACTTCAGGAAGAGAGACAGCAGGGATCCAAGCACCGCGACCGAGTTAGGCAGGATTGACACCGGTGGGGGGTCAGGGAGAAAATGGGGATTGGATGATTACGAAAGGCAGGATTCTCAGAGAGACAGCCCTGTAAATACTGCAAGAGCCAGAGAGACTCCGTGGAACCGCGACCTGGACAGAGAGCGTGCGGTTGCAGAAGCGAAAGTGTGGGGCGAGAACTGGAGAGAGAAGAAGAAGGCAAACGCTGTGGGTAGCTTCGATGCTACGAATGACTAA 1545 0.4867 MGGCFPCFGSSNKEGSGGVRVKEVPNRDSSFKEAAASVVPQSHHPSRVNSDKSKSRSGADTKKETPVPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAANQSNRVGPSTPRSRDDRRSMADSVDSPDHGRLGSPSTHRNSPDFRKRDSRDPSTATELGRIDTGGGSGRKWGLDDYERQDSQRDSPVNTARARETPWNRDLDRERAVAEAKVWGENWREKKKANAVGSFDATND* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0817 514 SUPERFAMILY Protein kinase-like (PK-like) 75 367 IPR011009 -
Gso15g0817 514 PANTHER OS07G0668900 PROTEIN 1 508 - -
Gso15g0817 514 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 508 - -
Gso15g0817 514 Pfam Protein kinase domain 98 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0817 514 MobiDBLite consensus disorder prediction 390 405 - -
Gso15g0817 514 CDD STKc_IRAK 99 368 - -
Gso15g0817 514 MobiDBLite consensus disorder prediction 1 73 - -
Gso15g0817 514 MobiDBLite consensus disorder prediction 420 435 - -
Gso15g0817 514 Gene3D Phosphorylase Kinase; domain 1 65 169 - -
Gso15g0817 514 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0817 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Gso15g0817 514 Gene3D Transferase(Phosphotransferase) domain 1 170 387 - -
Gso15g0817 514 MobiDBLite consensus disorder prediction 377 483 - -
Gso15g0817 514 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Gso15g0817 514 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0817 514 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0817 Gso-Chr15 7514947 7520484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0817 4 372 Glycoside Hydrolase AT3G07070 65.333 1.14e-170 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso15g0817 Pkinase 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0817 - - gmx:100814575 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0817 15 7514947 7520484 Gso11g2453 11 40531527 40540165 GST