Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0806 ATGATTCCCAAGATTTCTCCGATGAACGAGGATGGGAAGAACAGAGGAATCGGAATAGCCACCGAAAACCCTTATTATGGAACCTTTCAAGGCGTCGCTAACCACTATCCTCCTCAACACCAACAACCACCCGTTCCCTACGCTAATTATTACCAACGACAAGGATACCACGTCGTTCCAGTTTATGCCGTTGCTGAAGGAAGGCCTGTGAGAGAACGTCGTCTTCCTTGCTGTGGACTTAGTCTGGGTTGGTTCTTGTTTATAATGGGTTGGTTTCTTGGTGGTGTTCCCTGGTACGTTGGCACTTTCATTCTAATGTTTGTACATATGGATTGCCGAGAAAAGCCTGGATTGATTGCATGCGCAGTTGCTTCCTTCGTTACTGTGATTGTTCTTGCCCTTGGTGTCACACAAGGAGATCTTGGGAGGTTGACATCCTTTTGA 444 0.4662 MIPKISPMNEDGKNRGIGIATENPYYGTFQGVANHYPPQHQQPPVPYANYYQRQGYHVVPVYAVAEGRPVRERRLPCCGLSLGWFLFIMGWFLGGVPWYVGTFILMFVHMDCREKPGLIACAVASFVTVIVLALGVTQGDLGRLTSF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0806 147 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 8 139 IPR044804 -
Gso15g0806 147 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 8 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0806 Gso-Chr15 7417597 7421593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0806 25 141 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 35.754 7.69e-26 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0806 - - gmx:102662831 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0806 15 7417597 7421593 Gso15g0806 15 7417597 7421593 ECH