Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0796 ATGGGGAGGCTAATAAGAACTTCTAAACCTCTTATCTTCCACTCAAAGCTCCTCTGTTTTTCTCTGTTCTATCTCTTCACCACTCTGTTCCTTGCTCTCTACACCTCTCTGTCCCAATCCAAATGTTTCTTCCGATCGTCCCCTTCGGATCCCGTTCAGAATTCTCTCTTCTCTTACCCTTCTTCCTATGGGGAGCACAAGTACGCTGTGTCAACCACCCGTTCTACATGTTCTTCCCCTGTTTTCTTTTCAGATTACTCGGATGTTGTGAAGGAGATCAAGAATTGCCGCAATAACAATGTAGGCTATTCAGGGGCTCTGCGGTATATGCAAGGGAATTTGGATAGTTTTGGGGGGAATCTCAACACCCTTTCGAGGTTTTCTTATTTTGATCACCAAAATGATAGCACGGAAGTTCCATGCGGATTTCTGAAGAAATTTCCAATTAGTGATTCCGATCGAATTGCGATGGAGAAGTGTGACAGTGTGGTTGTGGTTTCAGCAATCTTCAATGATCATGATAAAATTCGTCAACCGAAGGGCCTTGGGTCCAATACATTGCAAGAAGTGTGTTTTTTTATGTTTGTAGATGATGTTACCCTCAAAGGTCTTGAACATCATGGATTGGTTTCAATAAATTCAAGAGAATACAAGATAGGTGTATGGAGGATTGTGAAGGTTGCAAAAGAGAATTTGTATCAGAACCCAGCAATGAATGGGGTTATACCAAAGTATTTAGTCCATAGGTTATTCCCACATTCCCACTTCAGCATTTGGATAGACGCAAAGTTGCAACTAATGGTTGATCCGTTATTGTTGATTCATTCTCTTGTTATATCTAAAAATGTAGACATGGCTATATCAAAACACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACTGCAAGATGGAAGAAATTGTTGGATGTCAACGCCTTGAAGGAACAAATGGAGACATACTGTGAAAATGGATTGCAACCATGGAGTCCCAACAAACAACCCTATGTGTCAGATGTACCAGATAGTGCTTTGATATTAAGGAGGCATGGACTTGGCAGTAACCTCTTCTCCTGCCTCATATTCAATGAGTTGCAGGCATTTAACCCAAGAGACCAATTGCCTTTTGCATTTGTTAGAGATCACATGAAGCCCAACCTGAAGCTGAACATGTTTGAGGTAGAAGTTTTTGAACAGGTGGCAGTGGAGTACAGACACAATCTCAAGAGCAGTGATGGGACCACTGTGAAGAAAGTGTTCAGTTCAGGAAGAACCAAAAGGGCACACCCTGATTTGTTGTATGTGAATGGAAGTTGTTGCAGCAAGTGCCAAAAGTATCTTTCTATAATGTGGGGGGAATCATCAAATGATTAA 1377 0.4132 MGRLIRTSKPLIFHSKLLCFSLFYLFTTLFLALYTSLSQSKCFFRSSPSDPVQNSLFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYSDVVKEIKNCRNNNVGYSGALRYMQGNLDSFGGNLNTLSRFSYFDHQNDSTEVPCGFLKKFPISDSDRIAMEKCDSVVVVSAIFNDHDKIRQPKGLGSNTLQEVCFFMFVDDVTLKGLEHHGLVSINSREYKIGVWRIVKVAKENLYQNPAMNGVIPKYLVHRLFPHSHFSIWIDAKLQLMVDPLLLIHSLVISKNVDMAISKHPYYVHTMEEAMATARWKKLLDVNALKEQMETYCENGLQPWSPNKQPYVSDVPDSALILRRHGLGSNLFSCLIFNELQAFNPRDQLPFAFVRDHMKPNLKLNMFEVEVFEQVAVEYRHNLKSSDGTTVKKVFSSGRTKRAHPDLLYVNGSCCSKCQKYLSIMWGESSND* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0796 458 Pfam Protein of unknown function (DUF616) 113 407 IPR006852 -
Gso15g0796 458 PANTHER OS01G0210400 PROTEIN 1 455 - -
Gso15g0796 458 PANTHER ALKALINE CERAMIDASE-RELATED 1 455 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0796 Gso-Chr15 7319222 7322620 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0796 - - gmx:100809755 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0796 15 7319222 7322620 Gso15g0796 15 7319222 7322620 ECH
Gso15g0796 15 7319222 7322620 Gso5g1393 5 37407669 37415250 PCT
Gso15g0796 15 7319222 7322620 Gso8g1009 8 9373750 9381180 PCT