Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0788 ATGAGGAGGAACTGCAACTTGGAACTCGCCCTTTTTCCTCCCTCTGATTCTGGCCCCCCCATGGTTGACAACGTTGAAGAAGAGGCTAGTGAAATCAGCCCAATGCAAAATTTGTTCCACCGCCAGGAACAGCAACAGCCGCTCACCATTTTCTATGATGGAAAGATTTGTGTTGCGGATGTCACAGAGCTTCAGGCCAAATCGATTTTAATGCTTGCAAATAGAAAATTGGAGGAAAGAGTGAGGACACCAACTGGGTCAGAGCCATCTTCACCAACAGTGATGCAATCTAATAATCAATTGTATAGTCCTGGCACTGGCCCTTCCATGAGAAAATCGTTGCAAAGGTTCCTTCAGAAGAGAAGGAATCGGGTCCAAGAAGCATCGCCATACCGTCACTAG 402 0.4677 MRRNCNLELALFPPSDSGPPMVDNVEEEASEISPMQNLFHRQEQQQPLTIFYDGKICVADVTELQAKSILMLANRKLEERVRTPTGSEPSSPTVMQSNNQLYSPGTGPSMRKSLQRFLQKRRNRVQEASPYRH* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0788 133 PANTHER - 1 133 - -
Gso15g0788 133 Pfam Jas motif 111 131 IPR018467 -
Gso15g0788 133 SMART tify_2 41 75 IPR010399 -
Gso15g0788 133 Pfam tify domain 43 74 IPR010399 -
Gso15g0788 133 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Gso15g0788 133 MobiDBLite consensus disorder prediction 84 113 - -
Gso15g0788 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 133 IPR040390 -
Gso15g0788 133 MobiDBLite consensus disorder prediction 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0788 Gso-Chr15 7204147 7207065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0788 1 131 Tify Gene Family AT1G30135 43.609 4.22e-27 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso15g0788 tify 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0788 - - gmx:100803886 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0788 15 7204147 7207065 Gso15g0788 15 7204147 7207065 ECH
Gso15g0788 15 7204147 7207065 Gso11g2477 11 40840341 40843568 GST