Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0783 ATGGAGGAGGATGAGATTCAAGCATGTAAGTTCCCTAGAGTTGGAAATGGTAGGAGTAGTGACCAATACCAAGAGGAGGAAGAAGAGGGTGACCTAAGAAGAAAAGGTGTTGGTGGTGGTGGTGGAAGTGATGCTAGCACAAACCACTTCCACCAAAGTAGTTGGCACTACTCTTCTAGAATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAAGTGATGACCTCAAAAGGGTTAAGAGACAGAAGGGTTAGGCTCTCTGTGACCACAGCTATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTACGACCAACCTAGCAAAGCTGTGGAGTGGCTAATCAAAGCTGCTTCAGAAGCTATCTCTGAGCTTCCTTCTCTCAACAACCCTTTCCCTGATACCCCTAAGCAGCCTAGTGATGAGAAAAGGCCTACCAGTGGTGGTGGTCAACAACAACAACAACAAGGCTTTGATGATGCAGATGGAGACACAAATTACCAACAAAACCAAAGCCAGAATCTTTCTCTCTCCAAGTCTGCTTGTAGCAGCACTTCCGAGACAAGCAAGGGCTCAGGCTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAACCGTGTGAAGGCAAGGGAGAGGGCAAGGGAGAGAGCAGCAAAAGAGAAGGAGAAGGAGAAAGAGAAAGAGAGTGATTTTAACATTGCACACCACCATCACCACCACAATGTGAACAACATGTCTCACACTGCTTCCTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACGGTAACAGTTAACCCCAACACAACAACAACAACAACAACAACAGCAACAAGTCCTAATGGATCATCGGTTCATCAGATCCATGAGGGTCATGATCATGAGGCTAATCTATTCAACAAGGGAAGTCAACAACAGCAACAGCAACAACATCACCATTGGTCTCAAACAGTGACACCTATGGACTACTTCAGCGCAGGCCTCTTGGTAGGACCTTCATCATCTGCAAGTACTCAACAACACCAATCTTCAGGACAGTTCCAACTGGGACATGGACATGCACATGCACATGCTCTTTCAATCTCACCATTTAGTGGAGAAAACCACTCGGAGCAAATGCAGCATTTTTCCTTCATGCCAGACCATCTCAACAACATGCCATCTTCTGCTGCTTCTGCTTCTCAACACAGCGAGGGTGACAATAACAACTACAACCTCAACTTCAGCATCTCTTCGTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTTCCTCGTTTTTGCCTCTCCTTCAGAGGTTTCAACCTTTAGTCGACGGATCCTCCAATCTACCTTTCTTTATAGGAGCTGCTCCTCCTTCTTCTGCTCCTCCAACCATGGACAACAACAACAGCAACAACAGCAACAACCATCACCACCTTCAGTTCTCACCCATCTTTGATGGCCGCTTGCAACTTTGCTATGGCGATGGAACAAGGCAGCATTCTGATCACAAGGGGAAGGGAAAGAACTAA 1536 0.4733 MEEDEIQACKFPRVGNGRSSDQYQEEEEEGDLRRKGVGGGGGSDASTNHFHQSSWHYSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASEAISELPSLNNPFPDTPKQPSDEKRPTSGGGQQQQQQGFDDADGDTNYQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKEKEKESDFNIAHHHHHHNVNNMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTATSPNGSSVHQIHEGHDHEANLFNKGSQQQQQQQHHHWSQTVTPMDYFSAGLLVGPSSSASTQQHQSSGQFQLGHGHAHAHALSISPFSGENHSEQMQHFSFMPDHLNNMPSSAASASQHSEGDNNNYNLNFSISSSGLAGYNRGTLQSNSPSSSFLPLLQRFQPLVDGSSNLPFFIGAAPPSSAPPTMDNNNSNNSNNHHHLQFSPIFDGRLQLCYGDGTRQHSDHKGKGKN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0783 511 MobiDBLite consensus disorder prediction 463 482 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 1 52 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 381 407 - -
Gso15g0783 511 PANTHER TRANSCRIPTION FACTOR TCP24 1 511 - -
Gso15g0783 511 ProSiteProfiles TCP domain profile. 70 128 IPR017887 -
Gso15g0783 511 ProSiteProfiles R domain profile. 205 223 IPR017888 -
Gso15g0783 511 MobiDBLite consensus disorder prediction 20 35 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 332 351 - -
Gso15g0783 511 Coils Coil 209 232 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 128 202 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 205 232 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 456 482 - -
Gso15g0783 511 MobiDBLite consensus disorder prediction 332 356 - -
Gso15g0783 511 Pfam TCP family transcription factor 69 225 IPR017887 -
Gso15g0783 511 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 511 IPR005333 GO:0003700
Gso15g0783 511 MobiDBLite consensus disorder prediction 128 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0783 Gso-Chr15 7134682 7145574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0783 53 511 TCP Transcription Factor Family AT4G18390 41.719 8.46e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso15g0783 TCP 2.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0783 - - gmx:100806032 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0783 15 7134682 7145574 Gso15g0783 15 7134682 7145574 ECH
Gso15g0783 15 7134682 7145574 Gso11g2485 11 40896528 40906840 GST