Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0764 ATGGCACACAACACAGAGGTGCCACCTTCTACGTCTTCACAACCTCATGAAAGAGACAAAGCCAACCAAAAAGTTCCCTTCTACAAGCTCTTCACTTTAGCTGATCGTCTTGACGTGGCATTGATTACCATTGGCACGATCGGTGCCATGGCTAATGGGTGCTCGCAGCCTCTCATGACCCTCATTCTAGGCAAAATTATCAACACCTTTGGCTCCGCCGATCCATCAAATACTATCAAGGAAGTTGCGTTATTATTTGTTTACCTGGCTATTGCAACTGGAATTGCGTCGTTTCTTCAGGTAGCATGTTGGATGGTGACAGGAGAAAGACAAGCCGCAAGGATCCGTGGATTGTACTTGAAAACTATATTGAAGCAAGACATTGCTTTCTTTGACACTGAAACAACAACTGGTGAGGTTATTGGGAGAATGTCTGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATACAACTCGCTTCGACTTTTATTGGTGGCTTTGTGATTGGCTTTGTAAGAGGATGGCGTCTCGCTCTTGTTTTGCTCGCATGCATACCATGTGTTGTTTTAATTGGTGGAGCTTTGTCCATGGTGATGACTAAAATGGCCAGTCGTGGGCAAGCTGCTTATGCAGAAGCAGGAAATGTGGTTGAGCAAACAGTGGGAGCTATTAGAACAGTGGCATCTTTCACTGGCGAGAAAAAAGCAATAGAAAAGTATAACACCAAGTTAAATGTTGCTTATAAAACAATGATTCAACAAGGTTTGGCCTCGGGGTTAGGAATGGGAGCACTTCTGCTGACTATCTTCTGCACCTATGCACTTGCCATGTGGTATGGTTCTAAACTGGTCATTGAGAAAGGATACAATGGTGGAACCGTCATCACTGTAATAGTAGCTCTTATGACTGGTGGAATGTCACTTGGTCAAACATCCCCAAGCCTAAATGCATTTGCAGCAGGCCAAGCAGCAGCTTATAAGATGTTTGAGACAATTGCACGAAAGCCAAAAATTGATGCTTATGACACCAATGGTGTTGTCTTGGAAGACATAAAGGGAGATATTGAACTCAAGAATGTTCACTTCAGATATCCTGCAAGGCCTGATGTTCAGATCTTTTCCGGATTCTCATTGTATGTTCCAAGTGGCACAACTGCTGCTTTAGTGGGCCAAAGTGGAAGCGGAAAGTCTACTGTGATCAATTTATTGGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGTGTGAATTTGAAGAATTTTCAAGTTAGATGGATAAGAGAACAAATTGGGCTCGTTAGTCAAGAACCTGTCCTGTTTGCAACTAGTATCAGAGAAAACATAGCCTATGGAAAAGAAGGTGCAACTAATGAGGAGGTTACAACGGCAATAAAACTTGCCAATGCTAAAAAGTTCATTGACAAGCTGCCTCAGGGCCTTGAGACAATGGCAGGCCAGAATGGGACTCAACTTTCTGGTGGGCAAAAGCAAAGAATTGCAATTGCAAGGGCAATTTTGAAGAACCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACATGTTGTCCAAGCAGCATTAGAACAAGCTATGTCAAAAAGAACTACTGTAGTTGTTGCACATCGCTTGACAACTATTAGAAATGCTGACACCATAGCAGTGGTTCATGAAGGCAAAATTGTAGAGCAAGGAACTCATGATGAGTTAATCAAGGATGTTGATGGTGCTTATTTTCAGCTTATTCGTCTACAAAAAGGAGCTAAGGAAGCTGAAGGTAGCCATAATTCTGAAGCAGAGAGGTCAAGTAGCAGTTTTAATTTAGATATTCACATGGCTAGATCTTCCACCCAGAGAGCAGTTTCAATAAGCAGAGGTTCATCAGGTAGACACTCCCAGTCACATAGCTTTTCTCTTTCTCATCAAAGTGGGGTACATGAATCTGGAGAAAGAGCCGGCGGGGATGCTGAGAAGCCCAGAAAGGTTTCTTTAAGACGTTTGGCCTACTTAAACAAGCCTGAAGTTCTTGTCTTAGTGCTTGGGTCCATTGCTGCAATAGTTCAAGGTGTTGTGTTCCCTATGTTTGGCTTCTTGTTTTCCTCAGCAATAGCTATGTTCTATGAACCTCCAGAAAAACAGCGGAAAGATTCTAGTTTCTGGGCACTTCTATATGTGGGTTTGGGTATAGTTACTCTAGTGATTATACCAGTGCAAAATTACTTCTTTGGCATTGCTGGTGGAAAATTAATAGAAAGAATTCGTTTACTGACATTTAAAAAGGTTGTGCACCAAGAAATCAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGGTTATCTACAGATGCTTCAACAGTGAAAAGTCTAGTGGGTGACACATTGGCCCTCATTGTGCAAAACATATCAACAATCACAGCAGGTCTAGTTATATCATTCACTGCTAATTGGATTCTTGCTTTAATAATTGTAGCTGTGTCACCCTTGATCTTTATACAAGGAGTTCTTCAGATGAAGTTTCTTAAAGGATTTAGTGGAGATGCCAAGGCTAAGTATGAAGAGGCAAGTCAAGTGGCAAATGATGCTGTTGGTAGCATCAGAACCATTGCATCATTCTGTGCCGAATCAAAGGTGATGGATATGTACAGGAAGAAATGTTTAGAGCCGGAAAAACAAGGTGTTAGGTTGGGGCTTGTGAGTGGTACAGGATTTGGCTTCTCTTTTCTGGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCTGTTCTTGTGCAACATGGGAAAGCAACTTTTCCAGAGGTTTTCAAGGTCTTCTTTTGTTTAACAATCACAGCCATAGGCATTTCCCAGACTAGTGTCTTAGCACCAGACACTAACAAGGCCAAAGATTCCGCAGCTTCAATATTTAAAATTCTTGACAGTAAACCTACCATTGACTCCAGCAGCAATGAGGGTAGAACACTAGAAGCCGTTTCTGGTGATATTGAACTTCAACATGTCAGTTTTAATTACCCAACTAGGCCTCATATTCAAATTTTCAAAGATTTGTGTCTAAGCATTCCAGCTGGAAAGACTGTTGCATTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTGATCAGCCTCTTGGAGAGATTTTACAACCCTGATTCTGGACATATACTACTAGATGGAGTGGATATAAAAGAGTTCAGACTAAGCTGGTTGAGGCAGCAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATCCGGGCCAACATAGCTTATGGCAAAGAGGGAGGTGCCACAGAGGCAGAGATAATTGCAGCAGCTGAAGCAGCCAATGCACAGGAGTTTATAAGTTCTCTTCCAAATGGTTATGACACCAATGTTGGAGAAAGAGGCACACAATTGTCAGGAGGACAAAAGCAGCGCATAGCCATTGCAAGAGCCATGCTGAAGGACCCCAAAATCCTTCTGCTGGATGAGGCAACTAGTGCACTTGATGCCGAGTCGGAGCGTGTAGTTGAAGAGGCTCTAGATAAAGTTAGCGTGGACAGAACAACTGTAGTGGTAGCTCACCGGCTTACAACAATTAGAGATGCTGACCTCATAGCAGTAATGAAAAATGGGGCAGTTGCTGAAAGGGGAAGACATAATGCATTGATGAAGATTACTGATGGAGTATATGCATCATTGGTAGCTCTACATATGAGTGCAGCTTAA 3774 0.4237 MAHNTEVPPSTSSQPHERDKANQKVPFYKLFTLADRLDVALITIGTIGAMANGCSQPLMTLILGKIINTFGSADPSNTIKEVALLFVYLAIATGIASFLQVACWMVTGERQAARIRGLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLASTFIGGFVIGFVRGWRLALVLLACIPCVVLIGGALSMVMTKMASRGQAAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNTKLNVAYKTMIQQGLASGLGMGALLLTIFCTYALAMWYGSKLVIEKGYNGGTVITVIVALMTGGMSLGQTSPSLNAFAAGQAAAYKMFETIARKPKIDAYDTNGVVLEDIKGDIELKNVHFRYPARPDVQIFSGFSLYVPSGTTAALVGQSGSGKSTVINLLERFYDPDAGEVLIDGVNLKNFQVRWIREQIGLVSQEPVLFATSIRENIAYGKEGATNEEVTTAIKLANAKKFIDKLPQGLETMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESEHVVQAALEQAMSKRTTVVVAHRLTTIRNADTIAVVHEGKIVEQGTHDELIKDVDGAYFQLIRLQKGAKEAEGSHNSEAERSSSSFNLDIHMARSSTQRAVSISRGSSGRHSQSHSFSLSHQSGVHESGERAGGDAEKPRKVSLRRLAYLNKPEVLVLVLGSIAAIVQGVVFPMFGFLFSSAIAMFYEPPEKQRKDSSFWALLYVGLGIVTLVIIPVQNYFFGIAGGKLIERIRLLTFKKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNISTITAGLVISFTANWILALIIVAVSPLIFIQGVLQMKFLKGFSGDAKAKYEEASQVANDAVGSIRTIASFCAESKVMDMYRKKCLEPEKQGVRLGLVSGTGFGFSFLALYCTNAFCFYIGSVLVQHGKATFPEVFKVFFCLTITAIGISQTSVLAPDTNKAKDSAASIFKILDSKPTIDSSSNEGRTLEAVSGDIELQHVSFNYPTRPHIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGHILLDGVDIKEFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEAEIIAAAEAANAQEFISSLPNGYDTNVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESERVVEEALDKVSVDRTTVVVAHRLTTIRDADLIAVMKNGAVAERGRHNALMKITDGVYASLVALHMSAA* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0764 1257 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Gso15g0764 1257 Gene3D ABC transporter type 1, transmembrane domain 84 988 IPR036640 GO:0005524|GO:0016021
Gso15g0764 1257 ProSitePatterns ABC transporters family signature. 1154 1168 IPR017871 GO:0005524
Gso15g0764 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1251 IPR003439 GO:0005524
Gso15g0764 1257 MobiDBLite consensus disorder prediction 633 672 - -
Gso15g0764 1257 Pfam ABC transporter transmembrane region 43 310 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso15g0764 1257 Pfam ABC transporter transmembrane region 693 964 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso15g0764 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1004 1252 IPR027417 -
Gso15g0764 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 599 IPR027417 -
Gso15g0764 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 44 326 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso15g0764 1257 SMART AAA_5 1041 1228 IPR003593 -
Gso15g0764 1257 SMART AAA_5 388 580 IPR003593 -
Gso15g0764 1257 Gene3D - 1004 1256 IPR027417 -
Gso15g0764 1257 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 19 1254 - -
Gso15g0764 1257 MobiDBLite consensus disorder prediction 1 20 - -
Gso15g0764 1257 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 1254 IPR039421 -
Gso15g0764 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 682 997 - -
Gso15g0764 1257 MobiDBLite consensus disorder prediction 1 16 - -
Gso15g0764 1257 Gene3D - 359 612 IPR027417 -
Gso15g0764 1257 SUPERFAMILY ABC transporter transmembrane region 29 345 IPR036640 GO:0005524|GO:0016021
Gso15g0764 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 693 979 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso15g0764 1257 MobiDBLite consensus disorder prediction 633 659 - -
Gso15g0764 1257 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524
Gso15g0764 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Gso15g0764 1257 CDD ABC_MTABC3_MDL1_MDL2 1014 1250 - -
Gso15g0764 1257 Pfam ABC transporter 381 528 IPR003439 GO:0005524
Gso15g0764 1257 Pfam ABC transporter 1033 1182 IPR003439 GO:0005524
Gso15g0764 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 42 322 - -
Gso15g0764 1257 SUPERFAMILY ABC transporter transmembrane region 673 995 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0764 Gso-Chr15 6923001 6928630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0764 8 1253 Calmodulin-binding Proteins AT2G36910 45.123 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0764 K05658 - gmx:100801771 2330.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0764 15 6923001 6928630 Gso15g0764 15 6923001 6928630 ECH