Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0762 ATGGTTGTGGAAGATGCCCAAAAATCAGCCATCACGGAGGACCAAAACCCTAGCAGGGTCGCCAACGACAACAACGACGACGAAGATCTCGAAGAGGGGGAGATCCTCGACGACGGTGACGACGGCGCCTCCGCCACATCAAAGCCTCCGTCCGCCCTCGTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAACCCTTCCGCCAAGTCCAAACAAGCCGCATGGGGCAGCTCCATCCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCACCCGAGCAAGTTGGGTGTGGGGGCGGACTTTCATTGCTTCAAGCACAAGATTGAGCCCAAGTGGGAGGATCCTATCTGCGCTAATGGGGGAAAGTGGACTATGACCTTCCAAAGGGGAAAATCTGATACCAGTTGGTTATATACGTTGTTGGCAATGATTGGAGAACAGTTTGATCACGGAGATGAAATATGCGGAGCTGTTGTGAATGTCAGAAGTAGGCAGGAAAAAATTGCTATTTGGACTAAGAACGCTTCAAATGAAGCTGCTCAGGTGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGACACAATTGGCTTTATATTTCATGAGGATGCAAAGAAGCTTGACAGAGGTGCTAAAAATAAATACGTTGTATGA 702 0.4929 MVVEDAQKSAITEDQNPSRVANDNNDDEDLEEGEILDDGDDGASATSKPPSALVRNPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGVGADFHCFKHKIEPKWEDPICANGGKWTMTFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRSRQEKIAIWTKNASNEAAQVSIGKQWKEFLDYNDTIGFIFHEDAKKLDRGAKNKYVV* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0762 233 MobiDBLite consensus disorder prediction 1 56 - -
Gso15g0762 233 Pfam Eukaryotic initiation factor 4E 59 210 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso15g0762 233 MobiDBLite consensus disorder prediction 25 39 - -
Gso15g0762 233 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 233 IPR023398 -
Gso15g0762 233 SUPERFAMILY eIF4e-like 51 229 IPR023398 -
Gso15g0762 233 ProSitePatterns Eukaryotic initiation factor 4E signature. 114 137 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gso15g0762 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 233 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso15g0762 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0762 Gso-Chr15 6900378 6902456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0762 1 233 Eukaryotic Initiation Factors Gene Family AT4G18040 67.083 6.45e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0762 K03259 - gmx:100793288 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0762 15 6900378 6902456 Gso15g0762 15 6900378 6902456 ECH
Gso15g0762 15 6900378 6902456 Gso11g2510 11 41134664 41137233 GST