Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0749 ATGGCACCCAGAAAAGTCAAAGCCATGGGCATTGACTTGGGCACCACCTACAGCTGCGTGGCTGTGTGGAACCATAACCGCGTCGAGGTCATTCCCAACGACCAAGGCAACCGCACCACCCCTTCCTACGTTGCCTTCACCGACACTCAAAGGTTGTTGGGCGACGCTGCCATCAACCAGCGATCCATGAATCCTCAAAACACCGTCTTCGACGCCAAACGTTTGGTCGGTCGCAGATTCTCCGACCAGTCCGTACAGCAAGACATAAAGTTGTGGCCTTTTAAGGTTGTCCCTGGAGCCAGAGACAAGCCCATGATTGCTGTAACATACAAAGACGAAGAGAAACTCCTTGCAGCCGAAGAGATATCTTCCATGGTGCTGTTTAAGATGAAGGAGGTTGCCGAAGCCCATTTGGGTCATTTCGTAAAGGATGCAGTGATCACTGTCCCTGCTTACTTCAGCAACGCGCAGAGACAGGCCACTAAGGATGCCGGGAAAATCGCGGGTTTGAACGTGTTGAGGATCATCAACGAGCCAACCGCGGCTGCTATTGCTTACGGGTTGGACAAGAAAGGGTGGAGAGAAGGTGAGCAGAACGTGCTTGTGTTTGACCTCGGTGGTGGTACTTTTGATGTTTCCCTGGTTACAATTGATGAAGGGATGTTTAAGGTTAAAGCCACGGTGGGAGATACCCATTTGGGAGGTGTTGACTTTGACAACAAATTGGTCAACTATCTCGTGGGTATTTTCAAGAGGAGGTACAAGAAGGACATTGGTGAAAACCCCAAAGCTCTTGGAAGGTTGAGGTCAGCGTGTGAGAAAGCTAAGAGGATTCTCTCTTCAAGTTCCCAAACCACTATTGAGCTTGATTCTTTATGTGGAGGGGCTGATCTACATGCAATTGTTACAAGGGCCTTGTTCGAGGAACTGAACAAGGACTTGTTTATGAAGTGTATGGAGACGGTGGAGAAGTGCCTCAAGGAGGCAAGGATTGCTAAAAGCCAAGTTCATGAGCTTGTTCTGGTAGGAGGGTCTACTAGAATTCCAAAGGTGCAGCAACTTTTGAAGGACATGTTCAGTGTTAATGGTAACAAGGAACTTTGTAAAAGCATAAACCCTGATGAGGCCGTGGCGTATGGTGCGGCGGTTCAGGCCGCCATTTTGAGTGGCGAAGGAGACAAGAAGGTGGAGGAGTTGTTGCTGCTGGATGTGATGCCGCTTAGTCTTGGGATTGAGACTGATGCTGGTGAAATGTCAGTGTTGATTCCCAAGAACACCATGATCCCCACCAAGAGGGAGAGCGTCTTCTCCACTTTTTCTGATAATCAAACAAGTGTTTTGATCAAAGTGTTCGAGGGGGAGCATGCAAAGACAGAGGATAACTTCCTTCTTGGGAAGTTTGAGCTTTCTGGTTTCACTCCATCGCCAAGGGGAGTTCCACAAATCAATGTGGGGTTTGATGTTGGTGTTGATGGCATTGTGGAAGTCACTGCTAGAGATAGGAGCACGGGGCTGAAGAAGAAGATCACGATCAGCAACAAGCATGGGAGGTTGAGTCCTGAAGAGATGAGGAGGATGGTGAGAGATGCAGAGAAGTATAAGGCAGAGGATGAGGAGGTGAGTAACAAGGTGAGGGCCAAGAACTTGCTTGAGAATTATGCCTTTGAAATGAGGGACAGAGTGAAGAACCTTGAGAAGGTTGTGGAGGAGACCATAGAGTGGCTTGACAGAAACCAATTGGCTGAAACTGATGAGTTTGAGTACAAGAAGCAGGAGTTGGAAGAAAAGTTTCGGAAGTTTAGGTAA 1806 0.4828 MAPRKVKAMGIDLGTTYSCVAVWNHNRVEVIPNDQGNRTTPSYVAFTDTQRLLGDAAINQRSMNPQNTVFDAKRLVGRRFSDQSVQQDIKLWPFKVVPGARDKPMIAVTYKDEEKLLAAEEISSMVLFKMKEVAEAHLGHFVKDAVITVPAYFSNAQRQATKDAGKIAGLNVLRIINEPTAAAIAYGLDKKGWREGEQNVLVFDLGGGTFDVSLVTIDEGMFKVKATVGDTHLGGVDFDNKLVNYLVGIFKRRYKKDIGENPKALGRLRSACEKAKRILSSSSQTTIELDSLCGGADLHAIVTRALFEELNKDLFMKCMETVEKCLKEARIAKSQVHELVLVGGSTRIPKVQQLLKDMFSVNGNKELCKSINPDEAVAYGAAVQAAILSGEGDKKVEELLLLDVMPLSLGIETDAGEMSVLIPKNTMIPTKRESVFSTFSDNQTSVLIKVFEGEHAKTEDNFLLGKFELSGFTPSPRGVPQINVGFDVGVDGIVEVTARDRSTGLKKKITISNKHGRLSPEEMRRMVRDAEKYKAEDEEVSNKVRAKNLLENYAFEMRDRVKNLEKVVEETIEWLDRNQLAETDEFEYKKQELEEKFRKFR* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0749 601 PANTHER HEAT SHOCK PROTEIN 70KDA 4 595 IPR013126 GO:0005524|GO:0140662
Gso15g0749 601 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 4 595 - -
Gso15g0749 601 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Gso15g0749 601 Gene3D - 70 125 - -
Gso15g0749 601 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 597 IPR029048 -
Gso15g0749 601 Gene3D Actin; Chain A, domain 4 235 317 - -
Gso15g0749 601 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Gso15g0749 601 SUPERFAMILY Actin-like ATPase domain 8 190 IPR043129 -
Gso15g0749 601 Gene3D - 191 368 - -
Gso15g0749 601 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 546 IPR029047 -
Gso15g0749 601 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 7 20 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 35 47 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 57 65 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 145 165 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 208 218 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 371 391 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 398 417 - -
Gso15g0749 601 PRINTS 70kDa heat shock protein signature 479 495 - -
Gso15g0749 601 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 551 IPR029047 -
Gso15g0749 601 Pfam Hsp70 protein 9 599 IPR013126 GO:0005524|GO:0140662
Gso15g0749 601 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gso15g0749 601 Gene3D - 9 386 - -
Gso15g0749 601 Gene3D - 547 600 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0749 Gso-Chr15 6747156 6749327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0749 1 594 Calmodulin-binding Proteins AT1G16030 68.421 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0749 K03283 - gmx:100788531 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0749 15 6747156 6749327 Gso11g2522 11 41290915 41293104 GST