Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0748 ATGGCAACAAAAAAAGTCAAAGCTATAGGCATTGACTTGGGCACTAGCTACAGCTGTGTGGCTGTGTGGCAACACAACCGGGTCGAGGTCATTTCCAACGACACCACCCCTTCCTACGTTGCCTTCAATGACACCCAAAGGTTGTTGGGGGACTCCGCCATGAGCCAAAGATCCATGAATCCGCAAAATACCGTCTTTGACGGCAAACGTTTGATTGGTCAACGATTCTCCGACCAATCCGTACAGCAAGACATGAAGCTGTGGCCTTTTAAGGTTGTCCCTGACAACAGAGACAAGCCCATGGTCGCGGTCACTTACAAAGGCGAGGAGAAACTCCTTGCCCCCGAAGAGATATCTTCCATGGTGCTGTTTAAGATGAAGGAAGTTGCCGAAGCCCATTTGGGTCATTTCGTAAAGGATGCAGTGATCACTGTCCCTGCTTACTTCAGCAACGCACAGAGACAGGCCACTAAGGATGCCGGGAAAATCGCGGGTTTGAACGTGTTGAGGATCATCAGCGAACCAACTGCGGCTGCTATTGCTTACGGGTTGGACAGAAAAGGATTGAGAGTGGGTGAGCAGAACGTGCTTGTGTTTGATCTCGGTGGTGGTACTTTTGATGTTTCCTTGGTGACTATTTATGAAGAGATGTTTAAGGTTAAGGCTAGTGTGGGAGATACTCATTTGGGTGGTGTGGATTTTGATAACAAATTGGTGAACCATCTGGTGAATGTGTTTAGAGAGAAGCACAAGAAGGATATTAGCGGGAATGCGAAAGCTTTGGTGAGGTTGAGGTCAGCGTGCGAGAAAGCAAAGAGGATTCTGTCTTCGACTGCTCAGACAACGATTGAGCTTGATTGTTTATATGAAGGGGTTGATCTGTATGCCACTGTGACAAGGGCCTTGTTCGAGGAACTGAACAAGGACTTGTTTATGAAGTGTATGGAGACGGTGGAGAAGTGTCTCCTTGAGGCAAAGAGTGATAAGATTCAAGTCCATGAGATCGTTCTTGTTGGTGGGTCTACTAGAATTCCAAAGGTACAGCAACTTCTGAAGGACATGTTCAGTGTCAATGGTACCACCAAAGAGCTTTGCAAAGGCATCAACCCTGATGAAGCTGTGGCGTACGGTGCAGCAGTTCAAGCAGCAATTTTGAGCGGTGAAGGAGATAAAAAAGTGGAGGAATTGTTGTTGCCGGTTGTGATGCCAATTAGTATTGGATTCGAGGGTGCTGGTGGTGTGATGTCAGTGTTGATCCCCAAGAACACCGCGATCCCCACCAAGAAGGAGAGGGTTTGTTCCACCTTCTACGACAATCAGAAATCTCTTACAGTCAAAGTGTTCGAGGGAGAACAAGTTAAGACAAAGGATAACTTCTTTCTCGGCAAGTTTATCCTCTACGAGTTCGATCCATTACCAAAGGGAGTGCCACAAATCAACGTTATCTTTGATGTGGATGCTGATGGCATTGTGGAGGTAACCGCGGAAGATCAAGCCAAAGGGTTAAAAAAGAAGATCACAATCAATAGCAAGCACGGAAGGCTAAACCCGGAAGAGATAAGAAGAATGGTGAGAGATTCAAAGAGGTACAAGGCAGAGGATGAGGTGGTAAAGAAGAAGGTGAAGGCGAAGAACACACTCGAGAATTACGCTTATGAAATGAGGGAGAGAGCAAAGAAGATTGAAGAGGCAGTTGAGGAAACCATAGAGTGGCTAGAGTGTAACCAATTGGCAGAGATAGAGGAGTTTGATTGCAAGAAGCAAGAGCTAGGAAGGTACCTAAGAGATGATCCAAATTATAGTAACACCTCAAATTCTGGAGTTAAGGTTCCTATATGGTGTACATGGAGATGTCCACCTAATGGGTGGGTTTGCCTGAACACAGATGGTTCTGTGTTTGAGAACCATAGAAACGGGAGTACTGGGAGTGCGTGTGGTGGTCTAGTTCGTGATTCCTCAGGATGTTTCCTAGGTGGTTTCACTGTTAATATAGGTATCACAGCGGTTACTTTAGCGGAGCTATGGGGCGTAGTTCACGGTCTGAAGTTGGCGTGGGATCTTGGTTGCAAGAAGGTGAAGGTGGATATTGATTCTGGTCATGCTCTTGGTCTTATAAGGCATGGCCCAGTGGCTAAAGACCCAGCTTTTGCGTTGGTTTCGGAGATCAACGAGCTTGTTCGCAAAGAGTGGTTGGTGGAGTTCTCGCACGTGTTTAGAGAGTCCAATCGTGCGGCTGATAAGTTGGCTCACTTGGGACACTCCCACTCTTCGGAATCGGGTGCGAAGCGATTCTCGGACCCACCCTTTGCCCTTCTTGCTATTCTTCAAGATGACTTGGCAGGGGTTGCAAAGCAACGTGGCGTTCCCTAG 2370 0.4713 MATKKVKAIGIDLGTSYSCVAVWQHNRVEVISNDTTPSYVAFNDTQRLLGDSAMSQRSMNPQNTVFDGKRLIGQRFSDQSVQQDMKLWPFKVVPDNRDKPMVAVTYKGEEKLLAPEEISSMVLFKMKEVAEAHLGHFVKDAVITVPAYFSNAQRQATKDAGKIAGLNVLRIISEPTAAAIAYGLDRKGLRVGEQNVLVFDLGGGTFDVSLVTIYEEMFKVKASVGDTHLGGVDFDNKLVNHLVNVFREKHKKDISGNAKALVRLRSACEKAKRILSSTAQTTIELDCLYEGVDLYATVTRALFEELNKDLFMKCMETVEKCLLEAKSDKIQVHEIVLVGGSTRIPKVQQLLKDMFSVNGTTKELCKGINPDEAVAYGAAVQAAILSGEGDKKVEELLLPVVMPISIGFEGAGGVMSVLIPKNTAIPTKKERVCSTFYDNQKSLTVKVFEGEQVKTKDNFFLGKFILYEFDPLPKGVPQINVIFDVDADGIVEVTAEDQAKGLKKKITINSKHGRLNPEEIRRMVRDSKRYKAEDEVVKKKVKAKNTLENYAYEMRERAKKIEEAVEETIEWLECNQLAEIEEFDCKKQELGRYLRDDPNYSNTSNSGVKVPIWCTWRCPPNGWVCLNTDGSVFENHRNGSTGSACGGLVRDSSGCFLGGFTVNIGITAVTLAELWGVVHGLKLAWDLGCKKVKVDIDSGHALGLIRHGPVAKDPAFALVSEINELVRKEWLVEFSHVFRESNRAADKLAHLGHSHSSESGAKRFSDPPFALLAILQDDLAGVAKQRGVP* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0748 789 Pfam Reverse transcriptase-like 627 750 IPR002156 GO:0003676|GO:0004523
Gso15g0748 789 SUPERFAMILY Actin-like ATPase domain 8 186 IPR043129 -
Gso15g0748 789 PANTHER HEAT SHOCK PROTEIN 70KDA 4 591 IPR013126 GO:0005524|GO:0140662
Gso15g0748 789 Gene3D - 545 596 IPR029048 -
Gso15g0748 789 ProSitePatterns Heat shock hsp70 proteins family signature 2. 198 211 IPR018181 -
Gso15g0748 789 Gene3D - 187 365 - -
Gso15g0748 789 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 390 544 IPR029047 -
Gso15g0748 789 CDD RNase_H_like 626 750 IPR044730 -
Gso15g0748 789 Pfam Hsp70 protein 8 590 IPR013126 GO:0005524|GO:0140662
Gso15g0748 789 Gene3D - 623 753 IPR036397 GO:0003676
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 7 20 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 31 43 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 53 61 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 141 161 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 204 214 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 368 388 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 395 414 - -
Gso15g0748 789 PRINTS 70kDa heat shock protein signature 476 492 - -
Gso15g0748 789 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 4 591 - -
Gso15g0748 789 Gene3D - 9 383 - -
Gso15g0748 789 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 548 IPR029047 -
Gso15g0748 789 Gene3D - 66 121 - -
Gso15g0748 789 ProSiteProfiles RNase H type-1 domain profile. 620 754 IPR002156 GO:0003676|GO:0004523
Gso15g0748 789 SUPERFAMILY Actin-like ATPase domain 192 387 IPR043129 -
Gso15g0748 789 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 592 IPR029048 -
Gso15g0748 789 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gso15g0748 789 Gene3D Actin; Chain A, domain 4 231 313 - -
Gso15g0748 789 SUPERFAMILY Ribonuclease H-like 622 754 IPR012337 -
Gso15g0748 789 ProSitePatterns Heat shock hsp70 proteins family signature 3. 335 349 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0748 Gso-Chr15 6739684 6743107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0748 1 590 Calmodulin-binding Proteins AT1G16030 66.118 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0748 K03283 - gmx:100795699 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0748 15 6739684 6743107 Gso11g2523 11 41296604 41299419 GST