Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0733 ATGAAAGACAAAGAAAGTGGAGGCACAGGGGACACAAATGAAAAACAATTGGAGATTCCGCCAGAAACTTATAATCAGAGAGACATGGTGGTGGTTAAGTATTCTTGTGAGTATGGTGATTTCTGTAGACAACCATTTAATGAAGAGAGTTATGAGGATAAGAAGAATGAAGATATTGGTGATGATGTCATTCCCTCCTCAACCTCAAGTTGCCTTGGTGTTAGAAGGGATGCTAAGAAACATGGAAAGAGAGAAGGCACACTCAAGTTAAAGGAGAAGGATAATATTGGTCTTGGAGAAGAAAGGAAGTTGCTGAATGATGGGAAGGTTTCAAAGGAGAAGGATGAGTACAATAGAGAAAAGGAATATGAAAACTTAAGGAGGAGATTTGAGAGGAAAGCAAAGAAAGTTTTTCAAGAGCAACTCTTGACATTAGGAAGAGAAGTAGAGGAAGTTGAGTTTGGATCCAGTAAAATAGTGGAAAAAGATGTGTTGCAATCTGAATCACCTAGAACAATTTGCACCCCAAGTACACATGCTTTTTCCTCTTCAGCAGTTTCAAAGAATTCTATACTTGGAAATATTATAGAAGAGATTGAGAAAACTGAGAGGCCATCTCACAAGAAAATGAGTTCTGAGAGGCAGAACTTGAAACAATCTGAGGAGTTGAAGGTAAAGACTAACAGGCAGAAGCAACCACATCATCTTCCTCCCAGCAGAGAACTTAAGAGGAGGAAACAAAAGCCAAGCTCTAGGGTCAAAATACATTCTCCAAGAATGGTTTCCAAGGTTGAAATCTGCAAAATAAAGGCTCTAGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAAAGGGAGGAAATTGTAGAGGAAACAGAAACATCGGGATTAGAAAGCTTTGCTATGATTAAGTCTTCATTGGATCCAAAGCAAGATTTCAGTGATTCAATGACTGAGATGATCACGGAGAATCGGATTAGCAGGCCAGAAGAAATGGAAGATCTTTTGGCATGTTATCTGACTTTGAATGCAGATGAGTATCATGATCTCATCATCAAAGTGTTCCGGCAGGTATGGTCTGACATGAGCCAAGGTGGTTTAGGTATTAAACTAAACATGCAATGGAGTTACTATGAATAA 1143 0.3867 MKDKESGGTGDTNEKQLEIPPETYNQRDMVVVKYSCEYGDFCRQPFNEESYEDKKNEDIGDDVIPSSTSSCLGVRRDAKKHGKREGTLKLKEKDNIGLGEERKLLNDGKVSKEKDEYNREKEYENLRRRFERKAKKVFQEQLLTLGREVEEVEFGSSKIVEKDVLQSESPRTICTPSTHAFSSSAVSKNSILGNIIEEIEKTERPSHKKMSSERQNLKQSEELKVKTNRQKQPHHLPPSRELKRRKQKPSSRVKIHSPRMVSKVEICKIKALEDMKKAKLKMKKEREEIVEETETSGLESFAMIKSSLDPKQDFSDSMTEMITENRISRPEEMEDLLACYLTLNADEYHDLIIKVFRQVWSDMSQGGLGIKLNMQWSYYE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0733 380 MobiDBLite consensus disorder prediction 200 255 - -
Gso15g0733 380 PANTHER TRANSCRIPTION REPRESSOR OFP4 58 373 - -
Gso15g0733 380 MobiDBLite consensus disorder prediction 49 88 - -
Gso15g0733 380 MobiDBLite consensus disorder prediction 200 237 - -
Gso15g0733 380 ProSiteProfiles OVATE domain profile. 303 362 IPR006458 -
Gso15g0733 380 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 302 363 IPR006458 -
Gso15g0733 380 MobiDBLite consensus disorder prediction 1 26 - -
Gso15g0733 380 Coils Coil 120 140 - -
Gso15g0733 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 58 373 IPR038933 GO:0045892
Gso15g0733 380 MobiDBLite consensus disorder prediction 238 253 - -
Gso15g0733 380 Pfam Transcriptional repressor, ovate 307 363 IPR006458 -
Gso15g0733 380 Coils Coil 268 295 - -
Gso15g0733 380 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0733 Gso-Chr15 6619108 6626728 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso15g0733 Ovate 6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0733 - - gmx:102670537 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0733 15 6619108 6626728 Gso15g0733 15 6619108 6626728 ECH
Gso15g0733 15 6619108 6626728 Gso11g2538 11 41433215 41434456 GST
Gso5g1378 5 37252230 37253731 Gso15g0733 15 6619108 6626728 PCT
Gso8g0999 8 9254450 9256269 Gso15g0733 15 6619108 6626728 PCT
Gso15g0733 15 6619108 6626728 Gso5g1378 5 37252230 37253731 PCT
Gso15g0733 15 6619108 6626728 Gso8g0999 8 9254450 9256269 PCT