Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0720 ATGGATCAAAACACAAGCGAGGGAAGAGGTGAGGTATTGGGTCCGGTTTATGAAGGGGAAGATGGAAATTTGAGTAATTTGGTTGAAGGGGTTGTAGTTGTAATTGATGCTGTAGATGGGAACAGCTTGGGTGGAAGAGTTAGTATAAGTGAAGAAGCTGGAACTTCAGGAGAGGTTGGCAAGGATTTCGGATCTGATATGGAGCTAGAGGAGGGGATTGAGGAAGTTAAGGATCAGGACAATCATGATCAAGAAAATATCAGTGATGATAAATTGCTCGAGGTTGATCAGGGAACTAGTTATAATTCAAACCATTTGGTTAATCAAGTAGTGATTGAAACTGTGGTTGCAATTGAGTCTGTTCAGACTAAGTATGTCACTGAAGATAATAGGAAATTGGAAACAAAAGTTGATGAATCGGGGTTGAGCATGGTATCCATGAAAGCACCAGAAGGGGTGTCTGAAACTGATAAAGATTCACGTGTGATTGATATAAAGTGCAGCAGCTGCAAAAAGGTTTATGAGGATTCTGAAGGTGAAAGGGTTTGTAGGATTTGCCATCTGACTTCTGTGCAATCATCGGATGAAACAACTGTTGGCACCGCTAGTAGTGCTACAAGTGCAGACTTGATTCAGCTTGGTTGTGCTTGTAAAGATGAGCTAGGCATTGCACATGTTCATTGTGCTGAGGCGTGGTTCAAGCTTAAGGGGAACAGGTTATGTGAAATATGTGGTGAGACTGCAGAAAATGTTTCGGGTGTTACTAATTATGGATTTATGGAAAAGTGGAATGAAAGAAGATTCATGGACGACGATGGCAACTCATCCCACAGGTTTGGTGGATGCTGGCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTGGTAATAGCATTTGTTCTGCCATGGTTTTTCCGTGTAAATATGTTCTAG 936 0.4188 MDQNTSEGRGEVLGPVYEGEDGNLSNLVEGVVVVIDAVDGNSLGGRVSISEEAGTSGEVGKDFGSDMELEEGIEEVKDQDNHDQENISDDKLLEVDQGTSYNSNHLVNQVVIETVVAIESVQTKYVTEDNRKLETKVDESGLSMVSMKAPEGVSETDKDSRVIDIKCSSCKKVYEDSEGERVCRICHLTSVQSSDETTVGTASSATSADLIQLGCACKDELGIAHVHCAEAWFKLKGNRLCEICGETAENVSGVTNYGFMEKWNERRFMDDDGNSSHRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0720 311 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 311 - -
Gso15g0720 311 SMART ringv_2 182 245 IPR011016 GO:0008270
Gso15g0720 311 Pfam RING-variant domain 183 244 IPR011016 GO:0008270
Gso15g0720 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 248 IPR013083 -
Gso15g0720 311 ProSiteProfiles Zinc finger RING-CH-type profile. 175 251 IPR011016 GO:0008270
Gso15g0720 311 PANTHER ZINC FINGER, RING-CH-TYPE 1 311 - -
Gso15g0720 311 SUPERFAMILY RING/U-box 177 247 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso15g0720 Gso-Chr15 6491928 6495608 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0720 163 310 C3H Transcription Factor Family AT5G05830 39.744 4.51e-30 111
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0720 - - gmx:100791720 622.468
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0720 15 6491928 6495608 Gso11g2556 11 41619730 41623464 GST
Gso5g1358 5 37063171 37066408 Gso15g0720 15 6491928 6495608 PCT
Gso8g0981 8 9061808 9065921 Gso15g0720 15 6491928 6495608 PCT
Gso15g0720 15 6491928 6495608 Gso5g1358 5 37063171 37066408 PCT
Gso15g0720 15 6491928 6495608 Gso8g0981 8 9061808 9065921 PCT