Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g0720 | ATGGATCAAAACACAAGCGAGGGAAGAGGTGAGGTATTGGGTCCGGTTTATGAAGGGGAAGATGGAAATTTGAGTAATTTGGTTGAAGGGGTTGTAGTTGTAATTGATGCTGTAGATGGGAACAGCTTGGGTGGAAGAGTTAGTATAAGTGAAGAAGCTGGAACTTCAGGAGAGGTTGGCAAGGATTTCGGATCTGATATGGAGCTAGAGGAGGGGATTGAGGAAGTTAAGGATCAGGACAATCATGATCAAGAAAATATCAGTGATGATAAATTGCTCGAGGTTGATCAGGGAACTAGTTATAATTCAAACCATTTGGTTAATCAAGTAGTGATTGAAACTGTGGTTGCAATTGAGTCTGTTCAGACTAAGTATGTCACTGAAGATAATAGGAAATTGGAAACAAAAGTTGATGAATCGGGGTTGAGCATGGTATCCATGAAAGCACCAGAAGGGGTGTCTGAAACTGATAAAGATTCACGTGTGATTGATATAAAGTGCAGCAGCTGCAAAAAGGTTTATGAGGATTCTGAAGGTGAAAGGGTTTGTAGGATTTGCCATCTGACTTCTGTGCAATCATCGGATGAAACAACTGTTGGCACCGCTAGTAGTGCTACAAGTGCAGACTTGATTCAGCTTGGTTGTGCTTGTAAAGATGAGCTAGGCATTGCACATGTTCATTGTGCTGAGGCGTGGTTCAAGCTTAAGGGGAACAGGTTATGTGAAATATGTGGTGAGACTGCAGAAAATGTTTCGGGTGTTACTAATTATGGATTTATGGAAAAGTGGAATGAAAGAAGATTCATGGACGACGATGGCAACTCATCCCACAGGTTTGGTGGATGCTGGCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTGGTAATAGCATTTGTTCTGCCATGGTTTTTCCGTGTAAATATGTTCTAG | 936 | 0.4188 | MDQNTSEGRGEVLGPVYEGEDGNLSNLVEGVVVVIDAVDGNSLGGRVSISEEAGTSGEVGKDFGSDMELEEGIEEVKDQDNHDQENISDDKLLEVDQGTSYNSNHLVNQVVIETVVAIESVQTKYVTEDNRKLETKVDESGLSMVSMKAPEGVSETDKDSRVIDIKCSSCKKVYEDSEGERVCRICHLTSVQSSDETTVGTASSATSADLIQLGCACKDELGIAHVHCAEAWFKLKGNRLCEICGETAENVSGVTNYGFMEKWNERRFMDDDGNSSHRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF* | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g0720 | 311 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED | 1 | 311 | - | - | |
Gso15g0720 | 311 | SMART | ringv_2 | 182 | 245 | IPR011016 | GO:0008270 | |
Gso15g0720 | 311 | Pfam | RING-variant domain | 183 | 244 | IPR011016 | GO:0008270 | |
Gso15g0720 | 311 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 175 | 248 | IPR013083 | - | |
Gso15g0720 | 311 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 175 | 251 | IPR011016 | GO:0008270 | |
Gso15g0720 | 311 | PANTHER | ZINC FINGER, RING-CH-TYPE | 1 | 311 | - | - | |
Gso15g0720 | 311 | SUPERFAMILY | RING/U-box | 177 | 247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g0720 | Gso-Chr15 | 6491928 | 6495608 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso15g0720 | 163 | 310 | C3H Transcription Factor Family | AT5G05830 | 39.744 | 4.51e-30 | 111 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g0720 | - | - | gmx:100791720 | 622.468 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0720 | 15 | 6491928 | 6495608 | Gso11g2556 | 11 | 41619730 | 41623464 | GST | |
Gso5g1358 | 5 | 37063171 | 37066408 | Gso15g0720 | 15 | 6491928 | 6495608 | PCT | |
Gso8g0981 | 8 | 9061808 | 9065921 | Gso15g0720 | 15 | 6491928 | 6495608 | PCT | |
Gso15g0720 | 15 | 6491928 | 6495608 | Gso5g1358 | 5 | 37063171 | 37066408 | PCT | |
Gso15g0720 | 15 | 6491928 | 6495608 | Gso8g0981 | 8 | 9061808 | 9065921 | PCT |