Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0719 ATGACTGAGGATAAGGAGATGTCTTCCTCTGTCACCAATGGCGATGATTCCCTCACTGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAACCCAAACAGACTATTAGTTACATGGCAGAACGGGTTGTAGGAACTGGATCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCTATTAAAAAGGTTTTACAGGACAGAAGATACAAGAATCGCGAACTACAGTTAATGCGTGTTTTGGATCATCCAAATGTGATCTCTTTGAAGCATTGTTTCTTTTCAACTACAAGTACAGATGAGCTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCTATGTATAGAGTCATTAAGCACTATACCAATGCTAATCAAAGAATGCCAATCATCTATGTAAAACTTTATATGTACCAGATTTTCAGGGGGCTGGCTTATATACACACTGTGCCCAAAGTTTGCCACAGAGACTTGAAGCCTCAAAATATATTGGTGGATCCTCTTACACACCAAGTGAAGCTATGTGATTTTGGAAGTGCAAAAGTTCTAGTAAAAGGTGAAGCTAATATATCATACATATGTTCACGATTCTATCGTGCTCCAGAACTTATATTTGGTGCCACAGAGTATACAAGTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAGCTTCTTTTGGGCCAGCCATTATTCCCTGGCGAAAATGCAGTAGACCAGCTCGTACATATTATAAAGGTGCTTGGCACACCCACTCGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCAATTGATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCGCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCCATGCTCGCCTGCCAAATGGTCGTCCATTTCCTCCTCTATTTAACTTCAAACAGGAATTATCTGAAGCATCTCCAGTGCTTGTTAACAAATTGATACCTGACCACGTGAAGCGGCAAATAGGGCTGCAATTTGTTCCTCCAGCAGGATCATGA 1143 0.4173 MTEDKEMSSSVTNGDDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVLDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVIKHYTNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPHARLPNGRPFPPLFNFKQELSEASPVLVNKLIPDHVKRQIGLQFVPPAGS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0719 380 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0719 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Gso15g0719 380 PANTHER BNAANNG31110D PROTEIN 1 374 - -
Gso15g0719 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 374 - -
Gso15g0719 380 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Gso15g0719 380 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0719 380 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0719 380 CDD STKc_GSK3 35 327 IPR039192 -
Gso15g0719 380 Gene3D Transferase(Phosphotransferase) domain 1 120 367 - -
Gso15g0719 380 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Gso15g0719 380 SUPERFAMILY Protein kinase-like (PK-like) 39 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0719 Gso-Chr15 6474381 6478832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0719 44 335 MAP Kinase Gene Family AT3G59790 35.831 1.66e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gso15g0719 Pkinase 8.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0719 K14502 - gmx:100779448 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0719 15 6474381 6478832 Gso15g0719 15 6474381 6478832 ECH
Gso15g0719 15 6474381 6478832 Gso5g1357 5 37051018 37055329 PCT
Gso15g0719 15 6474381 6478832 Gso8g0980 8 9051102 9055612 PCT