Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0717 ATGAAGCCCTTTTGCACATTCTTCATTCTTCTTTCGCTGCTTGTTATTCTCGTTGAATCTTCATGCAAAAACGAAGACCAGGAGATGGTGTCCAAGGCCTTCCAATCTGTGTCTGGATTCAACTCTTCCTGGTTCGAAACAGGTTCCAACTGTTCAAATGCTGAGATTAAAGGGATAAATCTTTCGTCCAAGAACCTAAGTGGGAACATCTCGTGGAAGTATCTGAGGAACATATCCAAGTTGAAGGTTCTAGATCTGTCTGGGAATTTTCTACAAGGCCAGGTCCCAAACTGGTTCTGGAGAAGCTCAACCTTATTGGTAGTGAACCTTTCCAGCAACAGGTTCGGAGGGAGCATTAACCCCACTTCCCAAAACGGTTCATTTTCATCACTGCAAAATCTCAATCTCTCACACAACAGGTTCACCAACCGGCTTCACCTCTCTGGTTTCTCAAACCTTGAAAGCCTCGACCTTTCGCACAACAACCTCGGAACCTTGCCCTCCGGGTTCCAAAACCTCACCAATCTACACCACCTCGATCTCTCCAACTGCAACATCAAAGGAAACGTAAAACCCATCTCCTCCCTCACCACACTCTCCTTCTTGGATTTATCAAATAACACGTTGAACGGTAGTTTCCCCTCTGATTTCCCTCCCCTGAACAACATCAAATTCTTGAACGTCTCCCACAACAACCTCAAAGCCTCCACCACCTTAGATAGGTTCAAAAAGTTCGGCAAATCAGCGTTTATCCACGCCGGGCACAACTTCAACTACTACAACGAATCCAAAACGCCAAAACTCGATTCAAATTCAACCCCACAGCACCAACAGCCCCACCACATTCACGCGAAGAAGAAGCGGTCAAAAGAAAAACAGAAGTCAAAACACAAAACCAGAACCATGATTGTGGCCTCGTCCTGTGCCTCGGCACTTGTCGTTGTCTCGTTGTGCATGTGCTTGGTGTGGTGTTGCAGAAGGAGGAGGCAATTGGCGAAGAGGAGCAAGTGGGCGATCTCGAAGCCGGCCCCACTCAGCATCAAGATGATGGAGAAATCTGGACCGTTCGCGTTCGAGACCGAGTCAGGGACATCATGGGTCGCTGACCTCAAAGAACCATCTTCCGCACCCGTGGTCGTGTTCGAGAAGCCACTCATGAACCTCACCTTCGTCGACCTTCTCGCTGGCACGTCACACTTCGGCAAAGACTCCCTTCTCGCTGAGGGCAGGTGTGGGCCCGTTTATCGCGCTGTCTTACCCGGAGACATCCACGTGGCAATCAAAGTCCTCGAAAACGCCAGAGACGTCCATGATGATGACGCTGTCGCTCTCTTCGTTGACCTCTCCCAACTCAAACACCCCAATCTCTTGCCCCTCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTGGTGTTGTATGAGTTTATGTCGAACGGGGATTTGGGTAGGTGGTTGCAGGAGCTACCAACGGGGGAGACTAACGTGGAGGATTGGAGTGGTGACACGTGGGACATTATTCAAAACGGCGCCGCTTCTCGAGCCTCGCCCCCCGAAAAGATGGGGTGGTTAGTACGGCACCGAATTGCGGTGGGTGTGGCGCGTGGATTAGCGTTTCTGCACCACGCGGGGTCAAGGCCCGTCGTGCACGGACACCTCGTGACGTCCAACGTGCTTCTCGGCGACGACTTCGAGCCGCGAATTGCGGATTTCGGGTTTCGGAAGTTCGGGCGAGAAAGCGCGACGGCGAATTGTTCAACCGAGACGGACGTTTACTGTTTCGGGGTGGTGCTGATGGAGCTGCTGACGGGGAGGGCCGGCACGGCGGAGACGGTGGTTTGGGTGCGGAAGGCGGTGAGGGAGGGTCACGCGGTGAGGGCATTGGACGAGAGGCTCAAACTCGGCGGTGGAAGCGGCGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTCGCGTATTTGTGCACAGCCGAGTCGCCGGGGAAGAGGCCCACCATGCAGCAAGTGTTGGGCCTTCTCAAAGATATTCACCCGAGTCATGCACTCGACTGA 2049 0.5281 MKPFCTFFILLSLLVILVESSCKNEDQEMVSKAFQSVSGFNSSWFETGSNCSNAEIKGINLSSKNLSGNISWKYLRNISKLKVLDLSGNFLQGQVPNWFWRSSTLLVVNLSSNRFGGSINPTSQNGSFSSLQNLNLSHNRFTNRLHLSGFSNLESLDLSHNNLGTLPSGFQNLTNLHHLDLSNCNIKGNVKPISSLTTLSFLDLSNNTLNGSFPSDFPPLNNIKFLNVSHNNLKASTTLDRFKKFGKSAFIHAGHNFNYYNESKTPKLDSNSTPQHQQPHHIHAKKKRSKEKQKSKHKTRTMIVASSCASALVVVSLCMCLVWCCRRRRQLAKRSKWAISKPAPLSIKMMEKSGPFAFETESGTSWVADLKEPSSAPVVVFEKPLMNLTFVDLLAGTSHFGKDSLLAEGRCGPVYRAVLPGDIHVAIKVLENARDVHDDDAVALFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPTGETNVEDWSGDTWDIIQNGAASRASPPEKMGWLVRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDFEPRIADFGFRKFGRESATANCSTETDVYCFGVVLMELLTGRAGTAETVVWVRKAVREGHAVRALDERLKLGGGSGDSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPSHALD* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0717 682 Gene3D Ribonuclease Inhibitor 125 304 IPR032675 -
Gso15g0717 682 PRINTS Leucine-rich repeat signature 153 166 - -
Gso15g0717 682 PRINTS Leucine-rich repeat signature 196 209 - -
Gso15g0717 682 PANTHER KINASE, PUTATIVE-RELATED 3 682 - -
Gso15g0717 682 MobiDBLite consensus disorder prediction 264 278 - -
Gso15g0717 682 Gene3D Transferase(Phosphotransferase) domain 1 476 582 - -
Gso15g0717 682 MobiDBLite consensus disorder prediction 279 299 - -
Gso15g0717 682 Gene3D Transferase(Phosphotransferase) domain 1 583 680 - -
Gso15g0717 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 682 - -
Gso15g0717 682 SMART LRR_typ_2 150 172 IPR003591 -
Gso15g0717 682 SMART LRR_typ_2 78 101 IPR003591 -
Gso15g0717 682 SMART LRR_typ_2 173 203 IPR003591 -
Gso15g0717 682 ProSiteProfiles Leucine-rich repeat profile. 152 174 IPR001611 GO:0005515
Gso15g0717 682 Gene3D Ribonuclease Inhibitor 25 124 IPR032675 -
Gso15g0717 682 MobiDBLite consensus disorder prediction 264 299 - -
Gso15g0717 682 Pfam Leucine rich repeat 130 186 IPR001611 GO:0005515
Gso15g0717 682 Gene3D Phosphorylase Kinase; domain 1 360 475 - -
Gso15g0717 682 ProSiteProfiles Protein kinase domain profile. 400 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0717 682 Pfam Leucine Rich Repeat 80 99 IPR001611 GO:0005515
Gso15g0717 682 Pfam Protein tyrosine and serine/threonine kinase 404 574 IPR001245 GO:0004672|GO:0006468
Gso15g0717 682 SUPERFAMILY Protein kinase-like (PK-like) 378 672 IPR011009 -
Gso15g0717 682 SUPERFAMILY L domain-like 49 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0717 Gso-Chr15 6455733 6458909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0717 59 675 Receptor kinase-like Gene Family AT5G07280 31.108 3.81e-73 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gso15g0717 PK_Tyr_Ser-Thr 6.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0717 - - gmx:100778920 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0717 15 6455733 6458909 Gso15g0717 15 6455733 6458909 ECH
Gso15g0717 15 6455733 6458909 Gso11g2560 11 41653213 41656389 GST
Gso5g1356 5 37043251 37046498 Gso15g0717 15 6455733 6458909 PCT
Gso8g0978 8 9030850 9036130 Gso15g0717 15 6455733 6458909 PCT
Gso15g0717 15 6455733 6458909 Gso5g1356 5 37043251 37046498 PCT
Gso15g0717 15 6455733 6458909 Gso8g0978 8 9030850 9036130 PCT