Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0716 ATGGCCGACGTCGTTTCGAAGACCCCAACCAGCAGCCTCATCAGCCCCCACAAGAAGGAAACATCGAACCTTTTACTCGGTCGTTTCGAGATTGGGAAGCTCCTCGGGCATGGAACCTTCGCGAAGGTGTACTACGCCCGGAACGTCAAAACCGGCGAAGGCGTTGCCATCAAGGTAATCGACAAGGAGAAAATCCTCAAAGGTGGTTTGGTGGCGCACATCAAGCGCGAGATCTCTATCCTGCGCCGCGTGCGCCACCCCAACATCGTTCAGCTCTTCGAAGTCATGGCCACCAAGAGCAAGATCTATTTCGTCATGGAATACGTTCGCGGCGGCGAGCTTTTCAACAAGGTCGCGAAAGGGAGGCTCAAAGAAGAGGTTGCGAGAAAGTACTTTCAGCAATTAATCTCCGCGGTGGGGTTCTGCCACGCCAGAGGGGTGTACCACAGAGATCTCAAGCCTGAAAATTTGTTGCTTGATGAGAATGGCAATCTCAAAGTCTCTGATTTTGGGTTGAGTGCGGTGTCTGATCAAATCCGACAGGATGGTCTGTTCCACACTTTTTGTGGGACACCTGCGTATGTTGCTCCTGAGGTTTTGGCGAGAAAAGGGTACGATGGTGCTAAGGTGGATCTCTGGTCTTGTGGGGTGGTGTTGTTTGTGTTGATGGCAGGGTATTTACCCTTTCATGACCAGAATGTGATGGCTATGTATAAGAAGATTTATAGAGGGGAGTTTCGTTGTCCGAGGTGGTTTTCTCCTGATTTGTCAAGGCTTCTCACCAGGCTTCTTGATACCAAGCCTGAAACCCGGATTGCGATTCCTGAGATCATGGAGAATAAGTGGTTCAAGAAAGGGTTCAAGCAGATCAAGTTTTATGTGGAGGATGATAGGCTTTGCAATGTGGTGGATGATGATGGGCTTATGGACAATGATGATGATACTATTTCTATTGCTTCTGTTGCTACCTTTTCAGATTACTCGGTTTCGGAGTCTGATTCTGAGGTTGAGACTAGGAGGAGGAATGATGCCACTTTGCCTAGACCTCCTAGTTTGAATGCCTTTGACATTATATCGTTCTCTCCGGGCTTTGATCTTTCGGGGTTGTTTGAGGAGAAAGGGGATGAGACAAGGTTTGTGACTGCTGCACCGGTTAACAGGATCATTTCCAAGCTGGAGGAGATTGCTCAGTTGGTTAGTTTTTCGGTGAGGAAGAAGGACTGTAGGGTGAGTTTGGAGGGTACCAGAGAGGGGGTTAGGGGGCCTTTGACTATTGCTGCTGAGATATTTGAGTTGACACCTTCTTTGGTTGTAGTGGAGGTGAAGAAAAAGGGAGGAGATAGAGCTGAGTATGAGAGGTTTTGTAAAAATGAGTTGAAGCCTGGACTGCAGAATTTGATGGTGGAGGAGTCTGCTACTTCTTCAGACTTGTCTACACCTACTCAACCTTCCCTACTACGTGGCCTTTCTGAACCTGTGCCGGATATTTCTTCTGATATTGAAACCCCGCTCTATATACCTACTGATGATTGA 1533 0.4808 MADVVSKTPTSSLISPHKKETSNLLLGRFEIGKLLGHGTFAKVYYARNVKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTRLLDTKPETRIAIPEIMENKWFKKGFKQIKFYVEDDRLCNVVDDDGLMDNDDDTISIASVATFSDYSVSESDSEVETRRRNDATLPRPPSLNAFDIISFSPGFDLSGLFEEKGDETRFVTAAPVNRIISKLEEIAQLVSFSVRKKDCRVSLEGTREGVRGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCKNELKPGLQNLMVEESATSSDLSTPTQPSLLRGLSEPVPDISSDIETPLYIPTDD* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0716 510 CDD STKc_SnRK3 28 282 - -
Gso15g0716 510 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0716 510 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 11 474 - -
Gso15g0716 510 ProSiteProfiles NAF domain profile. 347 371 IPR018451 GO:0007165
Gso15g0716 510 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Gso15g0716 510 Pfam NAF domain 349 405 IPR004041 GO:0007165
Gso15g0716 510 CDD CIPK_C 353 464 - -
Gso15g0716 510 MobiDBLite consensus disorder prediction 470 500 - -
Gso15g0716 510 Gene3D Kinase associated domain 1, KA1 347 468 - -
Gso15g0716 510 MobiDBLite consensus disorder prediction 470 486 - -
Gso15g0716 510 Gene3D Transferase(Phosphotransferase) domain 1 19 341 - -
Gso15g0716 510 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0716 510 SUPERFAMILY Protein kinase-like (PK-like) 25 284 IPR011009 -
Gso15g0716 510 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0716 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Gso15g0716 510 PANTHER - 11 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0716 Gso-Chr15 6443065 6445224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0716 24 485 CBL-interacting serine-threonine protein kinases AT4G18700 78.465 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso15g0716 Pkinase 6.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0716 - - gmx:100790133 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0716 15 6443065 6445224 Gso15g0716 15 6443065 6445224 ECH
Gso15g0716 15 6443065 6445224 Gso11g2561 11 41667701 41669879 GST