Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0706 ATGCCGGACTTCCACGACTCCCTCTCCACCACGCCGCCGCCGCAGCCGTCCCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCCTCCGCCACGCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCACGGCCACACTAAAAAGACGCACCGTACCGACGTCCAGTGCAAGAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGGCCTCCAACGGTACTCTCTCTTCCTCTTGGCCTTTCTACGAGCGCTTGGACGCTCTTATCGGCCCTAATTTTAGCGCGAAGAAATCCACCTCCCCGCCGTCTCCGTCGCCGCCGGTGGCTCTTCCTTTGCTGCCGCATCGGAAGAACCAAAACCAGAACCCTTCCTCTTCTCCTGCGATTTCGGTGCCGCCAACGGCCGTCGCGCTGCCGCAGAAGCGCTCTGCGGCAGCGGCGATGGACGAGGGTTACTTCAGGAGGAATTACTCCGCCGTGGCTGCCGCAGCGGCGGCGGCGGAGGCTGATGAGGAGGAAGATGAGGATGAGGCGGAGGATTTGGAGGAGGAGGAAGAATGTGAAGAGGAAGGGAGGGGGAGCGAAGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGTGAAGTGTATGAGAGAATGGAGGCGCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGGAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATCAAGCGCGGGAAAAGATCTGGCTCTAACGATATGTATAGCTAG 921 0.5983 MPDFHDSLSTTPPPQPSRPVPVREDCWSEEASATLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGTLSSSWPFYERLDALIGPNFSAKKSTSPPSPSPPVALPLLPHRKNQNQNPSSSPAISVPPTAVALPQKRSAAAAMDEGYFRRNYSAVAAAAAAAEADEEEDEDEAEDLEEEEECEEEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERMEAQKLRQMVDLEKQRMQFAKDLEVQRMEMFMDTQVQLERIKRGKRSGSNDMYS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0706 306 Coils Coil 236 256 - -
Gso15g0706 306 MobiDBLite consensus disorder prediction 1 24 - -
Gso15g0706 306 Pfam Myb/SANT-like DNA-binding domain 24 118 IPR044822 -
Gso15g0706 306 MobiDBLite consensus disorder prediction 197 223 - -
Gso15g0706 306 PANTHER OS05G0560600 PROTEIN 1 302 - -
Gso15g0706 306 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 302 IPR044823 -
Gso15g0706 306 MobiDBLite consensus disorder prediction 123 163 - -
Gso15g0706 306 MobiDBLite consensus disorder prediction 194 235 - -
Gso15g0706 306 MobiDBLite consensus disorder prediction 145 161 - -
Gso15g0706 306 Gene3D - 27 93 - -
Gso15g0706 306 Coils Coil 194 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0706 Gso-Chr15 6327671 6332908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0706 23 305 Trihelix Transcription Factor Family AT3G14180 31.921 3.68e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso15g0706 Myb_DNA-bind_4 7.4e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0706 - - gmx:100785349 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0706 15 6327671 6332908 Gso15g0706 15 6327671 6332908 ECH
Gso15g0706 15 6327671 6332908 Gso11g2573 11 41769717 41775181 GST