Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0699 ATGTCAACCCCTTCATCATCATCATCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATCAGAAGGTTTCTCCAATCCAAAGCAACCAGAAAGCGTTGTGACCCCTCTGATCGGTTTGACACAGCTAAGAGCAGAGTTGAACACAACAACAAGGTTGAAAATCTTGAAACAGTTCACGTTATGGAGAAGCATAAGGAGGAGGAAGAGTCTGTGATCATGTTGCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGATAGTGGCAGCAAAGGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTTAGTAAGTTGATAACAGAACTTGGCGTGGTGCCGGTGTTGGTATCTATGGTGGCGTCGCCGGTGGCTAGCCGCCGGCGAGTAGGGTTGACGGCGTTGATCCACCTAGCTGATGGAACCTACACGAACAAGGCTTTGATAGTTGAGGCAGGAATATTGTCCAAGCTGCCTAAGACAATTGACCTTGTAGATGAATCAACAACAAGTAAATTGGCAGAGATACTTTTGTCATTGTCATCTCTTGCAAACACTCAATTCCCTCTTGCTTCATTAGACTTTATACCGTTACTTAGAAACATTCTTGAGACAGGCCCAAGTTTTGACACCAAAAGTTCGTGTTTATGTGCCTTACATAACCTATCAACTGTGTTAGAGAATGCATGCCCTTTGGTTTCAAGTGGGGTGGTCCCTATCCTCTTGGATGTGTCCTCAATAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCAGTGACTTTGATGGGAAAGAAAGCAATAGAGAACAATTCAATGGTGCCAGAAACCTTTATTGAGATCTTGTCATGGGAAGACAAACCCAAATGCCAAGAGTTGTCAGTGTATATTTTGATGATTCTAGCACATCAAAGCTCACTGCAAAGAAAGAAAATGGCACAGGCAGGGATTGTTCCTGTGCTTCTTGAAGTGGTTTTGTTGGGGAGCCCTTTGGCTCAGAAGAGAGCAATGAAACTATTGCAATGGTTCAAGGATGAGAGGCAAACCAAGGTGGGGCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGGTCACCAGTGAATCAAAGAGAAGCAAAAGAAGGGAAGAGATTGATGAAGAGTTTGGTGAAACAAAGTTTGCATAGGAATATGGAAATAATAGCGCAGAGGGCAAATGCAGCAGGGGAGTCTTCTAGATTGAAGTCTTTGATTATTAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1311 0.4317 MSTPSSSSSSSSSIWVLSNIKLQFFARIRRFLQSKATRKRCDPSDRFDTAKSRVEHNNKVENLETVHVMEKHKEEEESVIMLQRTVKMLHFGSWEEKIVAAKEIEKLAKEDVKVSKLITELGVVPVLVSMVASPVASRRRVGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTTSKLAEILLSLSSLANTQFPLASLDFIPLLRNILETGPSFDTKSSCLCALHNLSTVLENACPLVSSGVVPILLDVSSIKEISEKALATLGNLSVTLMGKKAIENNSMVPETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVVLLGSPLAQKRAMKLLQWFKDERQTKVGPHSGPQTPRFAMGSPVNQREAKEGKRLMKSLVKQSLHRNMEIIAQRANAAGESSRLKSLIISTSSKSLPY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0699 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 69 436 - -
Gso15g0699 436 MobiDBLite consensus disorder prediction 363 385 - -
Gso15g0699 436 Gene3D - 54 424 IPR011989 -
Gso15g0699 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 69 436 - -
Gso15g0699 436 SUPERFAMILY ARM repeat 83 357 IPR016024 -
Gso15g0699 436 SMART arm_5 194 235 IPR000225 GO:0005515
Gso15g0699 436 SMART arm_5 153 193 IPR000225 GO:0005515
Gso15g0699 436 SMART arm_5 111 151 IPR000225 GO:0005515
Gso15g0699 436 SMART arm_5 236 274 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0699 Gso-Chr15 6258089 6261429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0699 95 374 U-box Gene Family AT1G67530 29.861 1.39e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0699 - - gmx:100819002 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0699 15 6258089 6261429 Gso15g0699 15 6258089 6261429 ECH
Gso15g0699 15 6258089 6261429 Gso11g2579 11 41834436 41837753 GST