Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0684 ATGGGTTCAGGTGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAAGAAGGCAGATCAAAGAAAGCAAAGGGTATCTTAACTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATCCAGGAAAAGAATCCAGTGGTTTAACAAATGGTATTAAAAGTGAAAACCTTGTGTCAGCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTTCGAGCTTATAAGGCTAGAAAAGCTTTACGTCGCATGAAAGGATTTACAAAACTGAAGATCCTAACAGAAGGCTTTTCTGTTAAAAAGCAAGCTAGTACAGCTGTAACATACCTTCATTCATGGAGCAAGATACAAGCTGAGATTAGAGCTCGTCGAATCTGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAGGCAAAGCTTCATGATCTGGAGGTTGAATGGTGTGGTGGTTCTGAAACCATGGAGGAAATCCTTGGAAGGATACATCACAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCTTTTTCCCATCAGTGGAGGGCCAACTCTAGTCAGAACCAACTGCTTGGTAATTATGAACTTAGCAAAGCTAATTGGGGTTGGAGCTGGAAGGAATGCTGGATTGCTGCTCGTCCATGGGAAAGCCGTATCCCTAGCTTATCCGTCACCCCGGAGAAAGCTCAACATAAGCAGCCAAGCCCAAGCAAAGTTCAGAAGGATAAGAACACATCAACACCAAAAACTCCCGTCTCATTTAAACCTCCTTCAGCCAATGCAAAAGGGACTCCTCCCTCGGCCAACGCAAAAGGCACTTCAAAAGCTAGGAGATTGTCTTATCCAACAACTGAGAAAACTCTGGTCCAAAGAGTGCAATGA 927 0.4283 MGSGDWFKTIISLRKSKEGRSKKAKGILTQEKLNASKSNNYPGKESSGLTNGIKSENLVSAGVSVETIAATRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAVTYLHSWSKIQAEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCGGSETMEEILGRIHHREEAAVKRERAMAYAFSHQWRANSSQNQLLGNYELSKANWGWSWKECWIAARPWESRIPSLSVTPEKAQHKQPSPSKVQKDKNTSTPKTPVSFKPPSANAKGTPPSANAKGTSKARRLSYPTTEKTLVQRVQ* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0684 308 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Gso15g0684 308 MobiDBLite consensus disorder prediction 275 308 - -
Gso15g0684 308 MobiDBLite consensus disorder prediction 238 269 - -
Gso15g0684 308 PANTHER IQ-DOMAIN 5-RELATED 1 300 - -
Gso15g0684 308 MobiDBLite consensus disorder prediction 238 308 - -
Gso15g0684 308 PANTHER IQ-DOMAIN 9 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0684 Gso-Chr15 6143155 6146716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0684 1 297 IQD Protein Family AT2G33990 51.515 1.26e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0684 - - gmx:100813685 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0684 15 6143155 6146716 Gso15g0684 15 6143155 6146716 ECH
Gso15g0684 15 6143155 6146716 Gso11g2923 11 44991545 44995804 GST