Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0683 ATGGGATCTAGAGACAAAGATGGTGAGGAGTCACTTGGTATAGGCCTTCAGGTGATGCTAGCAGCAGCTTTCTCTTTATTTGGTGTGATCTTATTAATCATAATCTTCCATTTTTGTGTAAAATATTTCATTAAACGCCAACAAAGGAGACGCCAAAACAACTTTCTTTATCAAATCAGCACTCAAATTGCACCAATTGATGTGAGTTCTGTGGAGCCACGCAACTCTGGCTTTGACCCTTCGATCATAGCCTCTTTGCCTAAACTCTTGTACAAGCAAACGGACCAATTCAAGCAAGGTGAAGTTGTAGAGTGCTCGGTTTGCTTAGGCACTATTGTGGAAGATGCAATCACTAGGGTTCTACCAAATTGTAAGCACATTTTTCATGCTGATTGTGTTGATAAATGGTTTAATTCTAACACCACATGCCCAATTTGCCGCACCGTGGTTGACCCAAATGTGCAACCAGAACATGGTCATGTAGGTGCCACACGGGTTCACAACCAAGTCCAACCCACAGCACCACCGGCTGAGGGTGGTGTTGAGCTACAAGATGATAGTGAATTGGAGAGTGTGGGGTGTTCAGGTTTGAGAATAGGATCTTTTCATAGGATGATTGGTAATAGGGAAAGACCAGGAAGAAGGACTCAGAGCTGTGATGGATCTACCATATTAGATATAGAAAGGCGCTAA 693 0.43 MGSRDKDGEESLGIGLQVMLAAAFSLFGVILLIIIFHFCVKYFIKRQQRRRQNNFLYQISTQIAPIDVSSVEPRNSGFDPSIIASLPKLLYKQTDQFKQGEVVECSVCLGTIVEDAITRVLPNCKHIFHADCVDKWFNSNTTCPICRTVVDPNVQPEHGHVGATRVHNQVQPTAPPAEGGVELQDDSELESVGCSGLRIGSFHRMIGNRERPGRRTQSCDGSTILDIERR* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0683 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Gso15g0683 230 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Gso15g0683 230 Pfam Ring finger domain 104 147 IPR001841 -
Gso15g0683 230 PANTHER RING FINGER DOMAIN-CONTAINING 1 230 - -
Gso15g0683 230 SMART ring_2 105 146 IPR001841 -
Gso15g0683 230 SUPERFAMILY RING/U-box 85 153 - -
Gso15g0683 230 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0683 Gso-Chr15 6135811 6136910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0683 11 229 C3H Transcription Factor Family AT2G42360 32.599 1.98e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0683 K19038 - gmx:100779105 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0683 15 6135811 6136910 Gso15g0683 15 6135811 6136910 ECH
Gso15g0683 15 6135811 6136910 Gso11g2600 11 41976174 41976866 GST