Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0671 ATGAACCATGTTGAGCATATCGCTTATGACATGGTCATGATCACTCTATCCATATCTCTCATCGTTCTTGCCATCATCCTCTTCCTTGCTTGCAAGAAGAAGCCCGTTGAATCCGAAGAAACACTTCCCGTGAAGCTTTGTGCTCGTGCATACCCCTTGATGGAAATCGATGCTGCCACAGATGGCTTCAACCACAGGAGAATCATTGGCCAGGGTCGCTTAGGAACCGTGTATGCAGGGACACTAGAGCAAGAAGAACAACAACTTGTAGCCGTGAAGCGTATTCACCCCTTTCTTGTGTTGAGCAATGCAGGGTTTGGTTTCTCATCCGTGTTGAAGTGGCTCTCCTTGGCTCAACACCCCAACGTGGTTCCAATCACAGGGTTCTCAGAAGCACCCGGTGAGAGAGTTGTTTTGATGGAGTTTGTGCACATGGCAAGCTTGGACTTCTACTTGCACCAAAACCAAGATGGGGCTTCGCTTTTGGATTGGAACAAGAGGTTCAGGATTGCTGCTGGAGCAGCTAGAGGGCTTCAATACCTGCATGAAGTGGTGGCACCAAACATAGTACATGGATGTGTTAAGTCCTCTAATATTCTAATTGATGTTAACTTTTGTGCTAGGATTTGTGATTATGGGCTTAACTTTTTGGCACCTGTGGAAAAGAGGGGGACAGTGGGGTATGTGGATGATGAGTATTGGAGTGAAAGAAGGGGTGGTGGTGTAGCTACCAAGGAAAGTGATGTTTATGGGTTAGGGGTGGTTTTGTTGGAGCTTTTAAGTGGGAAAGGGTGTGAGGGAGGAATGTTGGTGAAGTGGGCTTTGCCTTTGATAAGGGAAACGAGTTTTAGTGAACTTTTGGATCCTAGGTTGGTGATTCCTTCTGACATGAAGCCTTTGGTTAGATTAGCCAAAGTTGCTTCAGCATGTGTTGGTAATTCACGCAAATGTAGGCCTTCGATGGCTCAAGTGGCAACCATTTTGAACAACTTAGAAACGGAAGTGTGTCTCTGA 1014 0.4625 MNHVEHIAYDMVMITLSISLIVLAIILFLACKKKPVESEETLPVKLCARAYPLMEIDAATDGFNHRRIIGQGRLGTVYAGTLEQEEQQLVAVKRIHPFLVLSNAGFGFSSVLKWLSLAQHPNVVPITGFSEAPGERVVLMEFVHMASLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARICDYGLNFLAPVEKRGTVGYVDDEYWSERRGGGVATKESDVYGLGVVLLELLSGKGCEGGMLVKWALPLIRETSFSELLDPRLVIPSDMKPLVRLAKVASACVGNSRKCRPSMAQVATILNNLETEVCL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0671 337 ProSiteProfiles Protein kinase domain profile. 63 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0671 337 Gene3D Phosphorylase Kinase; domain 1 29 142 - -
Gso15g0671 337 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 336 - -
Gso15g0671 337 SUPERFAMILY Protein kinase-like (PK-like) 40 328 IPR011009 -
Gso15g0671 337 Pfam Protein tyrosine and serine/threonine kinase 66 327 IPR001245 GO:0004672|GO:0006468
Gso15g0671 337 Gene3D Transferase(Phosphotransferase) domain 1 144 335 - -
Gso15g0671 337 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0671 Gso-Chr15 6010188 6012044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0671 48 328 Receptor kinase-like Gene Family AT3G59420 39.661 8.09e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gso15g0671 PK_Tyr_Ser-Thr 3.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0671 - - gmx:100808319 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0671 15 6010188 6012044 Gso15g0671 15 6010188 6012044 ECH
Gso15g0671 15 6010188 6012044 Gso11g2617 11 42151046 42152790 GST
Gso7g1712 7 39227201 39228975 Gso15g0671 15 6010188 6012044 PCT
Gso15g0671 15 6010188 6012044 Gso7g1712 7 39227201 39228975 PCT