Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0666 ATGGGAGTAGATTACTATAAGATTTTGCAGGTTGACAAGCATGCCACCGATGAAGAGTTGAAGAAAGCTTACAGAAAGCTTGCAATGAAATGGCACCCCGATAAGAATCCAACCAATAAGAAAGAGGCTGAGACTAAGTTCAAGCAGATATCCGAAGCTTATGAGGTTCTGAGTGATCCCCAGAAGAGAGCAATCTATGATGAATACGGAGAAGAAGGGCTTAAAGGGCAAGTGCCACCTCCAGATGCCGGTGGCCATACATTCTTCCAAACTGGAGATGGCCCAACAACGTTCAGGTTCAATCCAAGAAACGCAGATGACATTTTTGCTGAGTTTTTCGGGTTCTCGAGCCCGTTTGGTGGTGGTGGTGGCGGCGGCGGCAATGGCATGAGGGGTGGTTCCTTCGGTGGAATTTTTGGTGATGATATATTTAGTTCATTTGGAGAAGGAAGGACCATGAGTCAGCAAGGTCCACGCAAGGCACATCCCATCGAAAAGACATTGCCTTGCACCCTTGAGGAACTCTATAAGGGCACTACGAAAAAAATGAAGATCTCTAGGGAAATTGCTGATGCAAGCGGGAAAACTTTGCCGGTGGAAGAAATCTTGACCATTGACATTAAACCCGGGTGGAAAAAGGGGACAAAGATCACATTCCCTGAAAAAGGAAATGAGCAGCCAAATGTTATTGCTTCGGATCTTGTGTTTGTTATTGACGAGAAACCCCACCCTGTGTTTACCAGAGATGGTAATGATTTGGTTGTGACACAAAAGGTGTCACTTGAGGAAGCTCTAACGGGCCACATTGTCCATCTTACAACACTTAATGGCAGGGTTCTCAAAATTCCCATAAACAATGTTATTCATCCAACCTATGAAGAGGTGGTCCCCAGAGAAGGTATGCCAATTCCAAAAGACCCTTCGAAGAGAGGTAATCTTAGGATCAAATTCAACATCAAATTCCCAGCAAAGTTGACGTCAGAGCAGCAAGCCGGAATTAAGAAACTTCTGCCGTATTGA 1020 0.45 MGVDYYKILQVDKHATDEELKKAYRKLAMKWHPDKNPTNKKEAETKFKQISEAYEVLSDPQKRAIYDEYGEEGLKGQVPPPDAGGHTFFQTGDGPTTFRFNPRNADDIFAEFFGFSSPFGGGGGGGGNGMRGGSFGGIFGDDIFSSFGEGRTMSQQGPRKAHPIEKTLPCTLEELYKGTTKKMKISREIADASGKTLPVEEILTIDIKPGWKKGTKITFPEKGNEQPNVIASDLVFVIDEKPHPVFTRDGNDLVVTQKVSLEEALTGHIVHLTTLNGRVLKIPINNVIHPTYEEVVPREGMPIPKDPSKRGNLRIKFNIKFPAKLTSEQQAGIKKLLPY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0666 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 249 IPR008971 GO:0006457|GO:0051082
Gso15g0666 339 SMART dnaj_3 3 62 IPR001623 -
Gso15g0666 339 Gene3D DnaJ domain 3 124 IPR036869 -
Gso15g0666 339 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 337 - -
Gso15g0666 339 CDD DnaJ 4 59 IPR001623 -
Gso15g0666 339 Gene3D - 243 323 - -
Gso15g0666 339 SUPERFAMILY Chaperone J-domain 3 127 IPR036869 -
Gso15g0666 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Gso15g0666 339 Pfam DnaJ domain 4 67 IPR001623 -
Gso15g0666 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gso15g0666 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gso15g0666 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gso15g0666 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gso15g0666 339 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Gso15g0666 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gso15g0666 339 CDD DnaJ_C 164 325 - -
Gso15g0666 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gso15g0666 339 Gene3D - 163 241 - -
Gso15g0666 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0666 Gso-Chr15 5985429 5987433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0666 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 5.43e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0666 K09510 - gmx:100775897 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0666 15 5985429 5987433 Gso15g0666 15 5985429 5987433 ECH