Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g0653 | ATGGAGCAAGGAGTCGAAGAAGGAGGTGGCATGAACAAGATACCTCGGGATTCAAGAGTGAAGGAGATAAGACAAGGTGATGCACAAATTCAGGTTCAGGCTCCTCAGCAACCCCAAAAGTGTCCTCGATGCGACTCTCTCAACACCAAATTTTGCTATTACAACAACTATAGCCTCTCACAGCCTCGTTACTTTTGCAAAACATGCAGGAGGTACTGGACTCAAGGTGGAACCTTGAGGAACGTTCCTGTTGGTGGCGGTTGCCGCAAGGGGAAGCGCGCCAAGAGTTCTAACTCATCTTCTTCGGAGAATATGAATTCTTCTTCCAGATCACTGCCTCAACAACAACAACAACCGCAAGGGGTGGTGGTTCAAACTCAAGCACCACCCTTAACAACGGTGGTGAAGGCCAAAGACCCTTCTTCCGTTGTGGCTTCAACCTTTTACCAAAGTGGTGGGTACTTGTCTTCTTTGGCTGCTATGCATTCACTCAACTCATCATCACACCCTTTTGATCACTCTCTAAATTTTGCGGGTAGTGACACCTTGCGTTCTTCCAATTTGGGCCTTCTATCTGGTTTCAATGTTCAGCGCCCAATTGGGCCAATTCGTCCACCGCACTTGTATCATCAAATGGGGAGTGGTGAAAGGGAGATGGTGTCTCTGTATGAACAAGGTTTGGTCAATCCATCTTCATCCAGCATGGCTAATACTGATACTAATAGCAGTGGTGTTTCTCAGCATGATTGGCCTATGAGTTTCATCAATAACAATAACAATAATGCTAGTAATAGAGCCTCTGATGCCTCTTTGTGGAGCACCATCAGCACCACTGTTGGTGGTAACGCTGAGAGGACCAGTCCTAGTGGTGTTGGTGCTGGTTCTTCTTCTTTCGTCAAAAATCAATGGCCTAATCTTCCAGGGTATGGCCCTCCACCGTGA | 942 | 0.4703 | MEQGVEEGGGMNKIPRDSRVKEIRQGDAQIQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKSSNSSSSENMNSSSRSLPQQQQQPQGVVVQTQAPPLTTVVKAKDPSSVVASTFYQSGGYLSSLAAMHSLNSSSHPFDHSLNFAGSDTLRSSNLGLLSGFNVQRPIGPIRPPHLYHQMGSGEREMVSLYEQGLVNPSSSSMANTDTNSSGVSQHDWPMSFINNNNNNASNRASDASLWSTISTTVGGNAERTSPSGVGAGSSSFVKNQWPNLPGYGPPP* | 314 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g0653 | 313 | MobiDBLite | consensus disorder prediction | 83 | 123 | - | - | |
Gso15g0653 | 313 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 14 | 312 | IPR045174 | GO:0003700|GO:0006355 | |
Gso15g0653 | 313 | MobiDBLite | consensus disorder prediction | 93 | 123 | - | - | |
Gso15g0653 | 313 | MobiDBLite | consensus disorder prediction | 280 | 303 | - | - | |
Gso15g0653 | 313 | Pfam | Dof domain, zinc finger | 37 | 93 | IPR003851 | GO:0003677|GO:0006355 | |
Gso15g0653 | 313 | ProSiteProfiles | Zinc finger Dof-type profile. | 39 | 93 | IPR003851 | GO:0003677|GO:0006355 | |
Gso15g0653 | 313 | MobiDBLite | consensus disorder prediction | 280 | 313 | - | - | |
Gso15g0653 | 313 | ProSitePatterns | Zinc finger Dof-type signature. | 41 | 77 | IPR003851 | GO:0003677|GO:0006355 | |
Gso15g0653 | 313 | PANTHER | DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 | 14 | 312 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g0653 | Gso-Chr15 | 5817495 | 5819795 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso15g0653 | 12 | 101 | C2C2-Dof Transcription Factor Family | AT5G60200 | 63.333 | 6.63e-36 | 128 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Gso15g0653 | zf-Dof | 1e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g0653 | - | - | gmx:100817065 | 585.104 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0653 | 15 | 5817495 | 5819795 | Gso15g0653 | 15 | 5817495 | 5819795 | ECH | |
Gso15g0653 | 15 | 5817495 | 5819795 | Gso11g2642 | 11 | 42395233 | 42397587 | GST | |
Gso7g1685 | 7 | 38896599 | 38898072 | Gso15g0653 | 15 | 5817495 | 5819795 | PCT | |
Gso15g0653 | 15 | 5817495 | 5819795 | Gso7g1685 | 7 | 38896599 | 38898072 | PCT |