Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0647 ATGGGAAAAGCCTTCGACATCGGAGCCGTTCCGTTCAACGCCGACGGGTGGGGTCCGCCGGACAACGCGACCTCAGGCAGCAACAACAACAACCTCCCTCTGAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGACAAATTGGGCCGCATCGCCGACTGGACCCGCAACTTCAACAATCCGACCCGCTCCAAGAACCCCGCCGATGCCGTCTTCGACTTCGCCAACGACGACTCCTTCCCCGCCTCCGCCGACGACGACGCCTCCTTCCGCCTCGTCGACGGAAAGCCCCCGCCGCGCCCCAAATTCGGCCCCAAGTGGCGCTTCCAGCAGCAGCGCCAGCTCCCTCAGCGGCGCGACGAGGAAGTCGAGGCCAAGAAGCGCGAGCAGGAGAAGGAACGAGCCCGCAGAGACCGTCTCTACCACATGAACCGCTCAAACCCTAACCAACAGCGCCGCGAAGCCGCCGTCTTCAAATCCTCCGTGGATATCCAACCCGAGTGGAACATGCATGACCAGATCCCCTTCAGCACCTTCTCCAAGCTCTCCTTCACCGTTCCCGAACCCGAAGACCTCCTCCTCTGCGGCGCCCTCGAGTATTACGACCGCACCTACGATCGGATCACTCCCAAAAACGAACGCCGCCTCGAACGCTTCAAGAATCGGAACTTCTTCAAAGTCACCACCACCGACGACCCCGTCATTCGCAGACTCGCCAACGAGGACAAAGCCACCGTTTTCGCCACCGACACGATTCTCTCCACTCTCATGTGTGCTCCCAGGTCTGTTTATTCCTGGGACATTGTCGTTCAGCGTGTGGGGAATAAGCTCTTCTTCGATAAGCGCGATGGGTCGCAGCTTGATTTGCTCTCTGTTCACGAGACCTCGCAGGAGCCATTGCCTGAGTCGAAGGATGACATTAACTCTGCTCATTCGTTGAGCGTTGAGGCTGCTTATATTAACCAGAATTTTTCGCAGCAGGTGCTTATTAGGGATGGGAATAAGGTTACTTTTGATGAGGCTAACCCTTTTGCGAATGAGGGTGAGGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTGCATAGTGTTGTTGATGTGAACAAGCAGAGGTCGTTCCTTACTTTGAATGCGTTGAACGAGTTTGATCCTAAGTATTCCGGTGTGGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCTGTGTTGGCTACTGAACTTAAGAACAATGCGAATAAGTTGGCTAAGTGGACTGCTCAGGCTCTTTTGGCGAGTGCGGATACAATGAAGTTAGGGTATGTGTCGAGGATTCATCCCCGCGATCATTTCAATCATGTGATTTTGGCTGTGGTTGGCTATAAACCCAGGGACTTTGCAGCACAGATTAATTTGAACACGACGAATATGTGGGGGATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGGAAGTATGTTCTTGTGAAGGATCCATCTAAGCCCCAGGTTAGGATTTACGAGGTTCCCGCGGATGCGTTTGAAAATGACTATGTGGAGGAGCCACTTCCGGAGGATGAACAAGTTCAGCCTCCAGCAGAAGGCGCCGAGGGGGGAGAAGCAGCCGCTACTACTAATGATGTGGAAGACAAGCAGATAGATGGTCAAGCTTAA 1698 0.5383 MGKAFDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADAVFDFANDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPESKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEGAEGGEAAATTNDVEDKQIDGQA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0647 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 3 564 - -
Gso15g0647 565 MobiDBLite consensus disorder prediction 85 137 - -
Gso15g0647 565 MobiDBLite consensus disorder prediction 528 565 - -
Gso15g0647 565 MobiDBLite consensus disorder prediction 1 32 - -
Gso15g0647 565 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 528 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso15g0647 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 564 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso15g0647 565 MobiDBLite consensus disorder prediction 112 137 - -
Gso15g0647 565 PIRSF Transl_init_eIF3d 1 546 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso15g0647 565 Coils Coil 117 137 - -
Gso15g0647 565 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0647 Gso-Chr15 5758632 5761891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0647 1 562 Eukaryotic Initiation Factors Gene Family AT4G20980 79.046 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0647 K03251 - gmx:100799613 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0647 15 5758632 5761891 Gso11g2649 11 42444054 42449110 GST