Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0642 ATGATCAGACACAAGCACACACACCCTCTTCTTCTGTTAATTCTCCTTCTTTTCAACTCAGCATGTGCCATTGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTGTTGCTCTTTGGCAACGCCACCATCGACTCTCGAATTCTAACACTCACCCACCAGCAAAGTTTCTCTGTCGGTCGTGCCTTGTACAAAGAAAAAATCCCCGCCAAGAAACCAAACTCTTCTTACGTGTACCCTTTCTCCATCTCTTTCATCTTTGCCATGGCACCGTTTGAAGACACTCTTCCGGGGCACGGTTTAGTTTTCATCTTCACACCTATCACTGGCATCCACGGCACAAGTTCAGCACAACACCTCGGTCTGTTCAACCTCACCAACAACGGAAACTCAAGTAACCACGTGTTTGGTGTTGAGTTCGACGTGTTCCAGAACCAAGAGTTCGATGACATCAACGCCAACCATGTTGGGATTGACATAAACTCTCTTAAGTCTTATGTTTCCCATGATGCTGGGTATTGGCCAGATGGTGGTGACAAGTCCTTTAAGGAATTGGCGCTTAACAGTGGTGAGAATTACCAAGTTTGGATTGACTATGAAGATTCTTGGGTTAATGTTACCATGGCACCGGTGGGTATGAAAAGGCCTAGTAGGCCTTTGTTCAATGTTTCTCTCAACTTATCTCAGGTTTTTGAGGATGAAATGTTTGTTGGGTTTACTAGTGCCACTGGCCAATTAGTTGAGAGCCATAAGATTTTGGGGTGGAGTTTCAGCAATGAGAATTTTTCATTAAGTGATGAACTTATTACTATTGGGTTACCTTCTTTTGTTCTTCCAAAGGATTCAATTTTTAAGTCCAAGGGGCTTGTTGCAGGGTTTACTGTTGGAGTTTTCTTTGTTGTTTGTCTATTGGTTTTGTTGGCACTGTTTTTGATTCAGAGGAAGCGTGTGAAAGAAAGGAAGAGGCTGGAAATGGAAGATTGGGAGTTGGAGTATTGGCCACATAGAATGGCGTATGAAGAAATTGAGGCAGCAACAAAAGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTGAGAGGAGGGGTGGAGGTTGCTGTGAAGCGCATTTCTCATGAAAATGATGGTTTGCGAGAGTTTCTTGCTGAAGTTTCAAGCCTTGGGAGACTGAAGCAAAGGAATTTGGTAGGGTTGAGAGGTTGGTGCAAGAAAGATGTTGGGAATTTCTTGTTAATTTATGATTACATGGAAAATAGGAGCTTGGACAAGTGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAGTTATGAAGACAGAATAAGGATTCTTAAAGATGTAGCTTTTGCAGTGTTGTACTTGCATGAGGGGTGGGAAGCTAAGGTTGTGCATAGGGACATCAAGGCCAGCAATGTTTTACTTGATAAGGATATGAATGGAAGGCTTGGGGATTTTGGGTTAGCTAGAATGCATAGCCATGGTCAAGTTGCTAGCACCACAAAATTGGTTGGAACAGTGGGGTATATGGCTCCTGAAGTGATTAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGAATCTTGATTTTGGAGGTCTTGTGTGGAAGGAGACCTTTAGAAGAGGGTAAGTCACCTCTGGTGGAGTGGATTTGGCAACTAATGGTACAAGGGCAAGTTGAGTGTGCACTTGATGAAAGGCTAAGGGCTAAGGGAGATTTCAATGTGCAAGAAATGGAGAGGGTAATGCACTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGGCCAGACCCACAATGAGACAGGTGGTGAATGTTTTAGAGGGGAAGAATGAGGTAGACGACTCAGAAATTGAGAATATGGATACCTATTTGCTCCAACAGTTTAGCTATACGTCACACCCAACTTTCCAAGATATTCGTCACTCTTCCTCAATGTCTCTTACTTGGTCCGAAGTTGAGGGTAGGTGA 2001 0.4368 MIRHKHTHPLLLLILLLFNSACAIDFVFNGFNSSEVLLFGNATIDSRILTLTHQQSFSVGRALYKEKIPAKKPNSSYVYPFSISFIFAMAPFEDTLPGHGLVFIFTPITGIHGTSSAQHLGLFNLTNNGNSSNHVFGVEFDVFQNQEFDDINANHVGIDINSLKSYVSHDAGYWPDGGDKSFKELALNSGENYQVWIDYEDSWVNVTMAPVGMKRPSRPLFNVSLNLSQVFEDEMFVGFTSATGQLVESHKILGWSFSNENFSLSDELITIGLPSFVLPKDSIFKSKGLVAGFTVGVFFVVCLLVLLALFLIQRKRVKERKRLEMEDWELEYWPHRMAYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEVAVKRISHENDGLREFLAEVSSLGRLKQRNLVGLRGWCKKDVGNFLLIYDYMENRSLDKWVFDCDESKMLSYEDRIRILKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVIKTGRASTQTDVYMFGILILEVLCGRRPLEEGKSPLVEWIWQLMVQGQVECALDERLRAKGDFNVQEMERVMHLGLLCAYPEPKARPTMRQVVNVLEGKNEVDDSEIENMDTYLLQQFSYTSHPTFQDIRHSSSMSLTWSEVEGR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0642 666 SMART serkin_6 349 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0642 666 Gene3D Phosphorylase Kinase; domain 1 311 424 - -
Gso15g0642 666 Gene3D - 22 267 - -
Gso15g0642 666 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Gso15g0642 666 Pfam Legume lectin domain 24 261 IPR001220 GO:0030246
Gso15g0642 666 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0642 666 PANTHER - 6 659 - -
Gso15g0642 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 6 659 - -
Gso15g0642 666 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Gso15g0642 666 SUPERFAMILY Protein kinase-like (PK-like) 329 620 IPR011009 -
Gso15g0642 666 ProSiteProfiles Protein kinase domain profile. 349 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0642 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Gso15g0642 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 267 IPR013320 -
Gso15g0642 666 CDD lectin_legume_LecRK_Arcelin_ConA 24 258 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0642 Gso-Chr15 5715239 5717755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0642 19 565 Receptor kinase-like Gene Family AT4G04960 69.078 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso15g0642 Pkinase 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0642 - - gsj:114386544 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0642 15 5715239 5717755 Gso11g2654 11 42492738 42495362 GST