Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0606 ATGGACAATATTATTTACACTTTGCTTTTGATACTTTTTCTATCTCTGAAGGCTAGTAGTAGTGTTTCTTCTAGAGATAGACAATGGGGTGGTGTGAGGAGAATATTGAGCTCTGGGGATAATAATAATAATGATAATAATAATAATGGTGATCTTGTGACTAACTTGCCTGGCCAGCCTCCTGTAGATTTCCAGCACCATGCTGGATATGTCACTGTCAACGAAACTAATGGTCGAACACTCTTTTACTGGTTCTATGAGGCCATGACCAAGCCTGAAGATAAACCATTGGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTTGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTGGACACCGATGGCAGGGGCCTCAAGTTTAATAACTTTTCATGGAACAAAGAGGCCAACATGTTATTCCTGGAATCTCCTGTCGGGGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACAATTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGAGAGAGCTATGCAGGAAAGTATGTACCGGAGCTGGCCGAACTCATCCACGATAGAAACAAGGACCCTTCCCTTCACATTAATCTCAAGGGAATTTTGCTGGGTAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTTACAAAACTATAAAAGCAAGCTGTGACTTCAATAGCAGTGATCCGTGGAGTAACAATGATTGTACTCAAGGAGTGGATGAAACACTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCTGTCTGCTTCGCTAGTACAGCGCGTTCAAACGATCAATCGATGCAAATGGTGATGAGTCGCTCATCTAAAATGATGCCACGGATCATGGGAGGTTACGACCCATGTTTGGATGATTATGCTAAAACTTTTTATAATAGACCAGATGTTCAGAAGGCACTCCATGTCAGTGATGGTTACAATCTGAAGAATTGGAGTATTTGCAATGAAAACATATTCAAGGGCTGGGCACAATCAAAGCCTTCTGTTATCCCAATCTACAAGAAACTCATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACTGATGGTAGGGTGCCAGTGCTGTCAACAAGATACAGCTTAAGTATTCTAGGTTTGCCTATCACTAAGAGATGGAGGCCTTGGTACCATGAAAAGGAGGTAAGTGGGTGGTATCAAGAATACGAGGGGCTTACGTTTGCGACATTTCGGGGAGCTGGCCATGCAGTGCCTTGTTTCAAACGAAGCAACTCATTGGCATTCTTCTCCTCCTTTCTTCTTGGAAAATCCCCACCATCTACAAAATAA 1458 0.4259 MDNIIYTLLLILFLSLKASSSVSSRDRQWGGVRRILSSGDNNNNDNNNNGDLVTNLPGQPPVDFQHHAGYVTVNETNGRTLFYWFYEAMTKPEDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLKFNNFSWNKEANMLFLESPVGVGFSYSNTTSEYAQLGDDFTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHINLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCDFNSSDPWSNNDCTQGVDETLKQYNEIDIYSLYTSVCFASTARSNDQSMQMVMSRSSKMMPRIMGGYDPCLDDYAKTFYNRPDVQKALHVSDGYNLKNWSICNENIFKGWAQSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKRWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKRSNSLAFFSSFLLGKSPPSTK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0606 485 Gene3D - 384 478 - -
Gso15g0606 485 ProSitePatterns Serine carboxypeptidases, serine active site. 196 203 IPR018202 GO:0004185
Gso15g0606 485 Gene3D - 337 373 - -
Gso15g0606 485 Gene3D alpha/beta hydrolase 48 306 IPR029058 -
Gso15g0606 485 SUPERFAMILY alpha/beta-Hydrolases 49 480 IPR029058 -
Gso15g0606 485 MobiDBLite consensus disorder prediction 36 58 - -
Gso15g0606 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 145 IPR001563 GO:0004185|GO:0006508
Gso15g0606 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 156 IPR001563 GO:0004185|GO:0006508
Gso15g0606 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Gso15g0606 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Gso15g0606 485 Pfam Serine carboxypeptidase 57 476 IPR001563 GO:0004185|GO:0006508
Gso15g0606 485 MobiDBLite consensus disorder prediction 36 55 - -
Gso15g0606 485 PANTHER CARBOXYPEPTIDASE 7 481 - -
Gso15g0606 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 481 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0606 Gso-Chr15 5381251 5386429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0606 342 479 Calmodulin-binding Proteins AT2G22960 32.374 4.69e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0606 K16297 - gmx:100805845 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0606 15 5381251 5386429 Gso11g2692 11 42875095 42879728 GST
Gso7g1634 7 38251938 38258704 Gso15g0606 15 5381251 5386429 PCT
Gso15g0606 15 5381251 5386429 Gso7g1634 7 38251938 38258704 PCT