Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0600 ATGGGTAACATGAAGTTGGAGTTGCATGTTGGAGTTTTTGTCACCTGCATGGTGATTCTCATAGGGAGTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCAGCAATAAATAGTCTATATGTTTCTCTGGCGTCACCACCACTTCAAGGGTGGAAACCCGTGGGAGGAGATCCATGTTTGGAGCTGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCAGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTTCCATCCATTATAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTGCCCCCTACTCTGAGGAGCTTGTCTCTCTCAGCAAATCAGTTAAATGGAAGCATTCCAGATGCCTTGTCCTTATTAACTCAATTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGCTACCTTCATCAACAGGGAGTTTATCATCTCTTACCACATTACACTTGCAAAACAATCAACTTTCTGGGACCCTTTATGTTTTGCAAGACCTGCCTCTCCAAGATCTGAATATAGAGAACAATTTATTCTCTGGGCCAATTCCTCCAAAATTGCTGACTATCCCTAATTTCAGTAAAAATGGGAATCCATTTAATACTACTATTATTCCATCACCTCCTGCTGTGGCCCCTGCACCTGTAGCTATAGGTTCATCCCCCCAAGAATCGCCTTGGAAAGTGGCACATGGTCCTTCTGCCCTGACAGCACCAGTGCCTGCAAGTACTAGGAAGTCTGTTATAGCTAAGAGCGTCATTTGGATTGCTGGTGCAGGTCTTTTAGTATTTATTATATTGGGAGTTTTTCTTTTAATGTTGAGGTGCATTAAGAGAAGGCCGGAGAAGAAAAATGCAAATAAACTTGATGTGGGTGTGTTTGTGGGACCTTTGAATAAACCTACACGCAGTGACTCTGATGTTGAAGCAGCTAATCAAGAGGAGAAAGGTAAATTTGAAGTACCAAATAGAAGTACAGATTTCATTCCAAAGGTTCAGGAAGAACAAGACATATATGTGAAAGTAGTATCTGCAACATCAGAAGGCAATAATGGTCGTGAATCAATCAACACTGGAGGGGGTTCCAAACTTTCATCCCTGCAGCCACCACCACAACACTTTCTCCCAACCAGTCCTGGTGAGAAGGTCATTATTAATCCGGCTATAACTACACAAGTAACCAAAAGACAAGTCATGTCAAATTCCATCAGAGTTTATACTGTTGCATTGCTTCAACAATATACAAATAGCTTTTCCCAAGAAAACTGTATTGGGGAAGGTACACTTGGGCCTGTTTATCGAGCTGAGCTCCCTGGTGGAAAGCTATTGGCAGTGAGGAAATTGGATGCTACTGCTTCCATGGGTCAGAGTCATGAACAATTTCTTCAATTGGTGTCCAGCATCTCAAAAATTCAGCATGCAAATATTGCAAGGCTTGTAGGCTACTGTGCTGAGCATAGCCAACGACTACTTGTATATGAGTATTGCAGTAATGGGACTCTACATGATACACTGCATGGGTATGATAATCATTGTATCAAACTCCCATGGAATGCACGCATTCAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTTCTGAACGACAATTTGGAAGTGTGCATCTCTGATTGTGGATTAGGGCCATTACTCTCTTCTGGCTCTACTGGTCAGTTATCAGGACGCCTCCTTACAGCGTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGACGTCTTCAGTTTTGGTGTCGTAATGCTAGAACTTCTCACTGGACGAAAATCTTATGAAAAGTCACTGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAAGGGAACCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGCGGGAACCTGAATTCCGGCCGGCAATGTCGGAAATTGTTCAAGATCTCTTGCGAATAAAGTAA 2151 0.4268 MGNMKLELHVGVFVTCMVILIGSFCVGDTDMVDVAAINSLYVSLASPPLQGWKPVGGDPCLELWQGVACVFSNITAIHLRGMNLGGQLGSNLNFPSIIELDLSNNHIEGPIPFTLPPTLRSLSLSANQLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLTIPNFSKNGNPFNTTIIPSPPAVAPAPVAIGSSPQESPWKVAHGPSALTAPVPASTRKSVIAKSVIWIAGAGLLVFIILGVFLLMLRCIKRRPEKKNANKLDVGVFVGPLNKPTRSDSDVEAANQEEKGKFEVPNRSTDFIPKVQEEQDIYVKVVSATSEGNNGRESINTGGGSKLSSLQPPPQHFLPTSPGEKVIINPAITTQVTKRQVMSNSIRVYTVALLQQYTNSFSQENCIGEGTLGPVYRAELPGGKLLAVRKLDATASMGQSHEQFLQLVSSISKIQHANIARLVGYCAEHSQRLLVYEYCSNGTLHDTLHGYDNHCIKLPWNARIQVALGAARALEYLHENFQPPIVHRNFRSANVLLNDNLEVCISDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYEKSLPRGEQFLVRWAVPQLHDIDALSKMVDPCLKGTYPMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLRIK* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0600 716 Gene3D Phosphorylase Kinase; domain 1 402 515 - -
Gso15g0600 716 ProSiteProfiles Protein kinase domain profile. 438 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0600 716 MobiDBLite consensus disorder prediction 370 389 - -
Gso15g0600 716 PANTHER LEUCINE RICH REPEAT KINASE 2 140 715 - -
Gso15g0600 716 PANTHER LEUCINE RICH REPEAT KINASE 2 8 146 - -
Gso15g0600 716 Gene3D Ribonuclease Inhibitor 33 229 IPR032675 -
Gso15g0600 716 SUPERFAMILY Protein kinase-like (PK-like) 417 712 IPR011009 -
Gso15g0600 716 SUPERFAMILY L domain-like 33 209 - -
Gso15g0600 716 PRINTS Leucine-rich repeat signature 143 156 - -
Gso15g0600 716 PRINTS Leucine-rich repeat signature 164 177 - -
Gso15g0600 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 8 146 - -
Gso15g0600 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 140 715 - -
Gso15g0600 716 Gene3D Transferase(Phosphotransferase) domain 1 516 716 - -
Gso15g0600 716 Pfam Protein tyrosine and serine/threonine kinase 441 712 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0600 Gso-Chr15 5310741 5318719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0600 19 715 Strubbelig Receptor Gene Family AT4G03390 50.866 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso15g0600 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0600 - - gmx:100804771 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0600 15 5310741 5318719 Gso11g2698 11 42933381 42941378 GST
Gso7g1630 7 38184602 38191143 Gso15g0600 15 5310741 5318719 PCT
Gso15g0600 15 5310741 5318719 Gso7g1630 7 38184602 38191143 PCT