Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0586 ATGGCTTCGGCTTCGTCTTCGTCTTCGTCCTCCAAGCTATGCTTCAATTCCGACTGCAAAGAGTTGAAGTCCGAAAGACCTAAGAAAGGGTGGAGACTCCGCAGCGGAGAACTAGCCGAGCTTTGTGATCGATGCGGCTCTGCTTTTGAAGAAGGGAGGTTCTGTGAAATTTTTCACTCAAATGCTTCTGGTTGGAGGAGTTGTGAGACTTGTCGAAAGCGGATTCATTGTGGGTGTATTGTTTCAAGTCATGCTTTTATGTTGTTGGATCCCGGAGGAATTGAATGTTATTCATGTGCCCGCAAAAGTATTATTTTGCCATCTAACCTGCCTTGGCCACAGTCCTTTCCCCTTCAAAATCGTTTATCGGATAGACTTAGAGACCTATCTGGCAAAGGTTGGAGTCAGCTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCTGCTTCTTCATCTGACATGATCCCAGAAGTGCCTTCTTTAGTTGAACTATCCAATAGCTTTGACAAAATGTATTGCAATGAAAGGTTACCTGTCTCAGCCTTGGAAAAGAAAAATGAGGACTTGTCTGGAATATCAGTTAATTGGAACATCAAGCTTGGCTCGCGGGAGATGATGCTTATGAATGGAATGAGGAATGAGGATAAATCAAGTTCATGTTTAAATATGTGTCAACAGCCTTCTTCTCTGAAGGAAGAGTCATCTCCTCAACCATTTGGTTTGCCTGTGCCTAATTCATGCCAAAATGAAAGAAATGGTAAACTTGGGGTAACTGGAAGTCATCCACAACAAACTCCACCACCTCCAGGAAAGCAATTTAATGGCACTATGCATTTAGCACCTGATTCATCAGGTGAGGCTCAGGTTCGCAATGGGCGGCCTCGAGCAGATGCCCGAGGAAGAAATCAGTTATTGCCACGGTACTGGCCAAGGTGTACAGATCTGGAGCTACAGCAAATTTCTATTGATTCAAATTCTGTAATTACTCCCTTGTTTCAGAAAACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTTTAGTGCTACCCAAGAAGTGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTCTGGCCAAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCATGCATACAGTCCATGCAGTTGCAGGCTGGTGATACTGTAACATTTAGCCGGTTGGAGCCAGAGGGAAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTGTGCCATCCGATCAGGACAATGAGACCAAGACTGGAAATGGATTTTCTGCACATGGTGAAGTTGAATTGGCTGATCCTAATTCATGGTCTAAAGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGGAGCAAATCATTAATCTCTAGAAAAAGAAAGAGCAACATATTGGGCTCAAAGAGTAAACGTCTGAGAATTGAAAATGAGGATTTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGTCTGCTCCGGCCCCCTCCTAGCCACATTCCAAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGAAGCTCCAGTGCTTGGGAAGCCAACAATTTTTACCAGTGATAGTGTGGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTTTCAAGTGGCGCAAATTGCCAGCAAGTGCGCTTCTTCCATCAAAATGGACGTGTTCTGATAATTCGTGGGATCCAGAAAGATCTTCTTGTTCAGCTGCGCAAGAGCTGACAGCAGAGCAACTTGAGAATTTGCTACCTCCTTGTAGTTCAGCTGTTCCCAAGAAAATGAAGGCTGCCAAACAGGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGACACCCTTGCAAATCTAGCTATCCTGGGAGAGGGTGAGGCACTCCCAGCATCCGCGCAGGCCACAACTAAGCATCCACGTCACAGACCTGGCTGCTCTTGCATCGTTTGCATTCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGTGAAGCGACGTTTCCGTACCCTTATGTTACGGCGTGAGAAGAAACAATCAGAAAAAGAAGCAGAGACAACTCGTAAAAAGCAACAGCAACAACATCCTCAACCGTTACCTTCATCTGAAATTTTGCTTGATGAAGATTCCTTGCCCTGTAGTAACACAGGTGATAGTAGCCCAAACCAGAACAAAGAGGGTAATGATGGTTCTGATGATGATCCTAACCGAATAAAATCATCAGCTTTGCCATTCAAAGGTCAAATTGACCTCAATATCCAGCCAGAGCGAGAAGAAGAACTATCTCCTGGTTCAGATTCTGGCGGCATGATGAAGTTGCTCCATGATGCTACTGAGCGGTATCTCAAACAGCAGACTGTGAACTCTGGTACTGGAGATTCATCAGGCAGTCAATCACGGCTGGTAGGAGATGCAATGAGGGAAGATAAACTTAGCAATGGTGTTGCCCATGGCAGTGGTAGTCATAATACTGATAAGGAACATGCCCAATCTTTGTCTATGAATGTGTGA 2646 0.4471 MASASSSSSSSKLCFNSDCKELKSERPKKGWRLRSGELAELCDRCGSAFEEGRFCEIFHSNASGWRSCETCRKRIHCGCIVSSHAFMLLDPGGIECYSCARKSIILPSNLPWPQSFPLQNRLSDRLRDLSGKGWSQLAGSGPVPWKQAPSLFNSASSSDMIPEVPSLVELSNSFDKMYCNERLPVSALEKKNEDLSGISVNWNIKLGSREMMLMNGMRNEDKSSSCLNMCQQPSSLKEESSPQPFGLPVPNSCQNERNGKLGVTGSHPQQTPPPPGKQFNGTMHLAPDSSGEAQVRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSAVPSDQDNETKTGNGFSAHGEVELADPNSWSKVDKSGYIAKEALGSKSLISRKRKSNILGSKSKRLRIENEDLIELKITWQEAQGLLRPPPSHIPSIVVIEGFEFEEYEEAPVLGKPTIFTSDSVGEKIQWAQCEDCFKWRKLPASALLPSKWTCSDNSWDPERSSCSAAQELTAEQLENLLPPCSSAVPKKMKAAKQDPDNAEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQQHPQPLPSSEILLDEDSLPCSNTGDSSPNQNKEGNDGSDDDPNRIKSSALPFKGQIDLNIQPEREEELSPGSDSGGMMKLLHDATERYLKQQTVNSGTGDSSGSQSRLVGDAMREDKLSNGVAHGSGSHNTDKEHAQSLSMNV* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0586 881 MobiDBLite consensus disorder prediction 719 735 - -
Gso15g0586 881 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 9 452 - -
Gso15g0586 881 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 452 813 - -
Gso15g0586 881 SUPERFAMILY DNA-binding pseudobarrel domain 335 437 IPR015300 -
Gso15g0586 881 Pfam CW-type Zinc Finger 570 612 IPR011124 GO:0008270
Gso15g0586 881 SMART B3_2 338 439 IPR003340 GO:0003677
Gso15g0586 881 MobiDBLite consensus disorder prediction 826 846 - -
Gso15g0586 881 ProSiteProfiles B3 DNA-binding domain profile. 338 439 IPR003340 GO:0003677
Gso15g0586 881 CDD B3_DNA 336 437 IPR003340 GO:0003677
Gso15g0586 881 MobiDBLite consensus disorder prediction 753 771 - -
Gso15g0586 881 Gene3D - 569 622 - -
Gso15g0586 881 MobiDBLite consensus disorder prediction 861 881 - -
Gso15g0586 881 ProSiteProfiles Zinc finger CW-type profile. 565 615 IPR011124 GO:0008270
Gso15g0586 881 Coils Coil 719 739 - -
Gso15g0586 881 MobiDBLite consensus disorder prediction 441 455 - -
Gso15g0586 881 MobiDBLite consensus disorder prediction 224 282 - -
Gso15g0586 881 Pfam B3 DNA binding domain 338 437 IPR003340 GO:0003677
Gso15g0586 881 MobiDBLite consensus disorder prediction 438 461 - -
Gso15g0586 881 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 9 452 - -
Gso15g0586 881 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 452 813 - -
Gso15g0586 881 MobiDBLite consensus disorder prediction 224 267 - -
Gso15g0586 881 MobiDBLite consensus disorder prediction 719 881 - -
Gso15g0586 881 Gene3D - 316 442 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0586 Gso-Chr15 5176093 5186976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0586 269 723 B3 DNA Binding Superfamily AT4G32010 57.081 2.57e-166 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso15g0586 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0586 - - gmx:100807252 1749.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0586 15 5176093 5186976 Gso11g2713 11 43069030 43079077 GST