Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0581 ATGTCGAGTATCACTTTCTTCCAGCATCTCTCTAGAGCTTTCCGTGATAACCAGTCGCATCTTAAGCTTGTACTGCTCTGCACCGCCGTAAGTGGTGGTGGTCTTTGGGCTTATGGTGAGAGTGTTGCACCAGAAGAGGCAGTTAGCGAGAAGAAGAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCCACAAGTTTTATGAAGAATTTGAAGAATCCAAAATATGAGGTTCAAGTAGTATCGCCTCGTAACTACTTTGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGGACCGTCGAAGCGCGCAGCATTGTTGAGCCAGTTCGCAATATTTTTAAGAAGAAAAAGGTGGACGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCAGAAAATAGGAAAGTTTACTGTCGATCTAGTGTGAACAATAATTTGAATGGGAAAGAAGAATTTGTTGTGGATTATGACTACCTAATAGTTGCGGTGGGTGCTAATGTCAATACATTTAATACTCCAGGAGTGACGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCTAAAAAAATTAGAAGAACAGTTATTGACTGCTTCGAGAGAGCAAATTTGCCCGATGTAAGTGAAGATGAGAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCTACTGGAGTAGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGCTCCGTTTATATCCTGGGATTAAAGATTTAGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAGAGAATTACTACTTTTGCTGAAGACAAGTTTCGAAGAGACGGGATTGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCCGAGAAAGAAATTTCCACTAAAGAACTGAAAAACGGAGGAGAGATTAAGACAATTCCGTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTCATGGCACAAATCGGTCAGGCTAGCAGGCGTGCTCTAGCTACAGACGAGTGGTTGAGAGTTGAAGGGTGCAGCAATGTCTATGCGCTTGGTGACTGTGCCACGATAAACCAGCGGAAAGTCATGGAAGATATCGTGGCAATCTTTAAGAAGGCTGACAAAGAGAGTTCCGGAACACTTACGGTCAAACAATTTCAAGAGGTCATGAAAGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGCACAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGATATAAAAGAATCAATTGAACTGAATATTGAAGAACTCAAAACTGCACTTTCCAAAGTGGATTCTCAAATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAATCGGATGGAAGAGTGTGAAAAAAATCCTGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCACCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGCAAGCAAGTAAGCTGGCGTACTAGAGCTTTAGTAGTTTCAGACTGGACAAGACGTTTTATTTTTGGAAGGGACTCAAGTAGCATCTGA 1734 0.4268 MSSITFFQHLSRAFRDNQSHLKLVLLCTAVSGGGLWAYGESVAPEEAVSEKKKVVVLGTGWAATSFMKNLKNPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFKKKKVDVQFSEAECFKIDAENRKVYCRSSVNNNLNGKEEFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAKKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLLRLYPGIKDLVKITLLEAGDHILGMFDKRITTFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGEIKTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDIVAIFKKADKESSGTLTVKQFQEVMKDICERYPQVELYLKNKQMHNIADLLKEAKGDDIKESIELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0581 577 Coils Coil 439 459 - -
Gso15g0581 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Gso15g0581 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Gso15g0581 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Gso15g0581 577 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Gso15g0581 577 SUPERFAMILY FAD/NAD(P)-binding domain 218 372 IPR036188 -
Gso15g0581 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 380 IPR023753 GO:0016491
Gso15g0581 577 SUPERFAMILY EF-hand 368 464 IPR011992 -
Gso15g0581 577 PANTHER NAD(P)H DEHYDROGENASE B2 3 577 - -
Gso15g0581 577 Gene3D - 42 421 - -
Gso15g0581 577 Gene3D - 422 576 - -
Gso15g0581 577 PANTHER NADH DEHYDROGENASE 3 577 IPR045024 GO:0003954|GO:0006116
Gso15g0581 577 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0581 Gso-Chr15 5126036 5131167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0581 1 577 Chloroplast and Mitochondria Gene Families AT4G21490 72.727 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0581 K03885 - gmx:100802661 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0581 15 5126036 5131167 Gso11g2718 11 43120934 43126296 GST
Gso7g1615 7 37984743 37990205 Gso15g0581 15 5126036 5131167 PCT
Gso8g0498 8 4565630 4572312 Gso15g0581 15 5126036 5131167 PCT
Gso15g0581 15 5126036 5131167 Gso7g1615 7 37984743 37990205 PCT
Gso15g0581 15 5126036 5131167 Gso8g0498 8 4565630 4572312 PCT