Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0566 ATGAGGAAGTGTGAACTCTGTAACAGTCCCGCAAAGTTGTTCTGTGAATCAGATCAAGCCAGCCTCTGTTGGGAATGCGATGCTAAGGTTCACAGTGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCATGTTTGTCAATCACTAACGGCCTGGCACGGCACGGGACCCAAGTTTGTACCCACCATGTCCGTTTGCAACACTTGTGTCAACAACAATAGTGAGACCTGCAGCCAACAGAATCATGTTGAGGACCACGACGACAATCATGATGATGGCACGGGAGAGGATCATGTAGAAAACCATGATGGTGGTGTGTCTGAAGATGATGAAGAAAATCAAGTTGTTCCATGGACATCTACACCACCACCCCCAGCTTCCACTTCTTCAAATAGTGTTACAACTAGTTCTACCAGGTTCTCTAATGTTGAAGAAGGTGGCTCCGATTAA 459 0.4684 MRKCELCNSPAKLFCESDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTAWHGTGPKFVPTMSVCNTCVNNNSETCSQQNHVEDHDDNHDDGTGEDHVENHDGGVSEDDEENQVVPWTSTPPPPASTSSNSVTTSSTRFSNVEEGGSD* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0566 152 MobiDBLite consensus disorder prediction 83 112 - -
Gso15g0566 152 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Gso15g0566 152 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 144 - -
Gso15g0566 152 MobiDBLite consensus disorder prediction 82 152 - -
Gso15g0566 152 CDD Bbox1_BBX-like 3 45 - -
Gso15g0566 152 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gso15g0566 152 MobiDBLite consensus disorder prediction 128 152 - -
Gso15g0566 152 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Gso15g0566 152 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0566 Gso-Chr15 5021694 5022748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0566 2 95 C2C2-CO-like Transcription Factor Family AT4G27310 52.128 6.06e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso15g0566 zf-B_box 4.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0566 - - gmx:100805832 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0566 15 5021694 5022748 Gso11g2728 11 43222308 43223202 GST