Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0561 ATGGGATTCAGTACGCACATGTTACCTGTTTTTCTCATTCTGTCAAACTATTACATAAATTTTGTCACTGCCTTAGACACCATTATAGTGTCTCTATTAATGAAAGACCCTGAAACTGTGACCTCTAATGATGGTACATTCAAGCCAGGATTCTTCAGCCCCGGAAAGATGTCAAATCGCTATGTAGGAATCTGCTATCTGAGAGGTTTCGAGCGGAGAAACCGTGAGGAATTGAATAGGCAAAACCGGACAAGTGGATGTGTGAGAAGGGAAGCAACAGCAGTTGGTTACATGTCCCCTGAATATGCAATGGAAGGGCTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTGTTGGAGATAATTAGTGGTAGAGAAAACTCAAGTTTTCGTAATCACGAGCTGTTATTGAGCCTCTTAGGATACGCATGGCAACTATGGAATGAAGAGGAGATTGTATCTCTGATTGATCCAGAAATATTCAATCCAGATAATGTCAATCACATATTGAGATGCATACACATCGGACTTCTATGTGTGCAAGAATTAGCAAAGGAGACGCCTACTATGGCTACTGTGGTTTCAATGCTTAATAGTGAGGTTGTGAATTTTCCTCCTCCACGACAACCCTCGTTCATCTAA 651 0.4101 MGFSTHMLPVFLILSNYYINFVTALDTIIVSLLMKDPETVTSNDGTFKPGFFSPGKMSNRYVGICYLRGFERRNREELNRQNRTSGCVRREATAVGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRENSSFRNHELLLSLLGYAWQLWNEEEIVSLIDPEIFNPDNVNHILRCIHIGLLCVQELAKETPTMATVVSMLNSEVVNFPPPRQPSFI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0561 216 Gene3D Transferase(Phosphotransferase) domain 1 67 206 - -
Gso15g0561 216 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 86 214 - -
Gso15g0561 216 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 68 - -
Gso15g0561 216 SUPERFAMILY Protein kinase-like (PK-like) 95 213 IPR011009 -
Gso15g0561 216 Pfam Protein tyrosine and serine/threonine kinase 89 199 IPR001245 GO:0004672|GO:0006468
Gso15g0561 216 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 68 - -
Gso15g0561 216 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 86 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0561 Gso-Chr15 4966352 4968508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0561 96 215 Receptor kinase-like Gene Family AT4G23140 55.000 3.94e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g0561 PK_Tyr_Ser-Thr 2.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0561 - - gsj:114388084 423.705