Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0558 ATGGCTGGCTATACTATTCTGGCTGCTACAAACAATTTTTCTATTGTGAACAGGATGGGAGAAGGTGGTTTTGGCTCAGTATACAGGGGTAAATTGGCACATGGACAAGAAATAGCTGTGAAAAGGTTATCAAAAACCTCAAAGCAAGGAATCTCAGAGTTAATGAATGAAGTTGGATTGGTAGCCAAACTCCAACATCGTAATCTTGTGAGTGTTTTGGGAGGGTGCACTCAAGGAGAAGAAAGAATGTTGGTCTATGAATACATGGCAAATAGTAGCTTGGACCACTTCATTTTTGATCCTACACAAAGAAAATTTTTGAAGTGGAGGAAACTATATGAAATTATTATGGGGATTTCTCGGGGACTGCTTTATCTCCATCCAGATTCAAAGTTAACCATCATTCACAGGGATCTAAAAACTAGTAACATTCTACTAGACAGCGAATTGACCCCCAAAATTTCTGATTTTGGTCTTGCCCACATCTTTGAAGGAGGCCATTCTACAGTAACAACAAAAAGAATTGTTGGGACAGTTGGTTATATGTCCCCTGAGTATGCAGCAAATGGGCTTCTTTCCCTAAAGTATGATGTATTTAGCTTTGGAGTTATAGTGTTAGAGATATTAAGTGGCATCAGAAATAATAATTTCTACCATCCAGATCATGACCGTAATCTGTTGGGCCAGGCATGGAGATTATGGAAAGAAGGACGAACTGTGGAATTCATGGATGTTAATTTAGACCTTGCAACTATTCCATCAGAATTACTAAGGTGTCTGCAGGTTGGTCTCTTGTGTGTGCAAAAGTTACCTAAAGACAGGCCACCGACTATGTCGTCTGTGGTTTTCATGTTGAGCAATGAAAGTATTACACTTGCCCACCCAAAGAAGCCTGAATTCACTGAACAAGGGTTAGAGTTTCCAGGGTACAACAACAATTCTATGACTATTACTCTATTAGAAGCTCGAAATTAG 975 0.3938 MAGYTILAATNNFSIVNRMGEGGFGSVYRGKLAHGQEIAVKRLSKTSKQGISELMNEVGLVAKLQHRNLVSVLGGCTQGEERMLVYEYMANSSLDHFIFDPTQRKFLKWRKLYEIIMGISRGLLYLHPDSKLTIIHRDLKTSNILLDSELTPKISDFGLAHIFEGGHSTVTTKRIVGTVGYMSPEYAANGLLSLKYDVFSFGVIVLEILSGIRNNNFYHPDHDRNLLGQAWRLWKEGRTVEFMDVNLDLATIPSELLRCLQVGLLCVQKLPKDRPPTMSSVVFMLSNESITLAHPKKPEFTEQGLEFPGYNNNSMTITLLEARN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0558 324 Gene3D Transferase(Phosphotransferase) domain 1 89 299 - -
Gso15g0558 324 Gene3D Phosphorylase Kinase; domain 1 3 88 - -
Gso15g0558 324 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 5 318 - -
Gso15g0558 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Gso15g0558 324 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 318 - -
Gso15g0558 324 SMART serkin_6 13 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0558 324 Pfam Protein kinase domain 14 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0558 324 ProSiteProfiles Protein kinase domain profile. 13 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0558 324 SUPERFAMILY Protein kinase-like (PK-like) 6 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0558 Gso-Chr15 4944864 4946823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0558 5 304 Receptor kinase-like Gene Family AT4G11530 54.817 1.02e-113 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g0558 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0558 - - gsj:114388083 650.588