Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0557 ATGAAGAAAGTTGTTATCATTATTTTTGCTCTTGCTTGTCTATCAATCCTTCAGAAAACGTCATATGCAGCTGATGTCTTGACTCCAACATCTTCCATTAAAGGTGGCCAAGAACTCATTTCTGCTGGACAAAATTTTTCTCTTGGATTCTTCACTCCAGGAACCTCCAAAAGCCGCTATGTAGGGATATGGTACAAGAATATTTTGCCTCAAACCATAGTTTGGGTAGCAAACAGAGATAGTCCACTTAATGACACGAGTGGAAATTTAACCGTTGCTGCTGATGGGAATATTGTACTTTTTGATGGAGCAGGTAACAGAATATGGTTTACAAATTCATCAAGACCAATTCAAGAACCAATTGCAAAGCTGTTGGATTCGGGAAACTTGGTGCTGATAGATGGAAAGAACAGTGATTCTGATAGTTACATATGGCAAAGCTTTGATTATCCAACAGATACAATGTTACCTGGCTTGAAGTTGGGTTGGGATAAGACCTCAGGTCTCAATAGATATTTGACTTCTTGGAAGAGTGCTAATGACCCCTCTCCTGGAAACTTTACCTACAGATTTGACCAGAAAGAATTTCCTGAGTTGGTAATCCGCCAGGGAATGAACATCACATTCAGAAGTGGAATTTGGGACGGCATCCGTTTTAATTCAGATGATTGGTTATCATTTAACGAAATTACAGCCTTCAAGCCGCAGCTTTCAGTAACTAGAAATGAGGCAGTGTATTGGGATGAACCAGGAGATAGATTGTCAAGGTTTGTGATGAGGGATGACGGGTTACTTCAAAGATATATTTGGGACAACAAAATTCTTAAGTGGACTCAGATGTATGAGGCAAGGAAAGACTTTTGTGATACCTATGGAGCATGTGGGGCGAATGGTATTTGCAATATTAAGGATTTGCCTGCTTACTGTGATTGCTTGAAAGGCTTCATTCCAAATTCACAGGAAGAATGGGATTCATTTAATTGGTCTGGTGGGTGCATCAGGAGAACACCCTTAAACTGCACAGAAGGTGATAGGTTTCAGAAATTAAGCTGGGTAAAACTACCCATGTTATTGCAATTTTGGACTAATAATAGCATGAGTCTTGAAGAATGCCATGTGGAGTGCTTGAAGAACTGTTCCTGCACGGCGTATGCAAATTCTGCCTTGAATGAAGGGCCTCATGGCTGCTTGCTTTGGTTTGGGAACTTGATTGACATCAGGCTGCTTATAACTGAAGAGGATGCAGGTGGACAACTTGATCTTTATGTAAGGTTAGCTGCTTCAGAAATAGAGTCCACTGCGAATGCTAGTAAAAGGAGAAAGATAGCACTGATTATTTCGGCATCGTCTTTGGCACTGCTGCTTTTGTGTATTATTTTGTGCCTTTCTAAGAAGTATATAAAACGGAGGAGGACCACTACTGATTTGGTCGCAGGTCATAGAAATCATAATGAAGATCAAGCACCACCTCTTTTTGAGATAGATACTATTCTGGCCGCTACAAACAATTTTTCAATTGAGAACAAGATTGGGGAAGGTGGTTTTGGCCCAGTATACAGGGGTAAATTGGCTCACGGACAAGAAATAGCTGTTAAAAGGCTATCAAAAACCTCAAAACAAGGCATCTCAGAGTTTATGAATGAAGTTGGATTGGTAGCCAAACTCCAACACCGTAATCTTGTGAGTGTTTTGGGTGGGTGCACTCAAGGAGAAGAAAGAATGTTGGTCTATGAATACATGCCAAATAGTAGCTTGGACCACTTCATTTTTGATCCTAAGCAAGGAAAAACTTTGAAGTGGAGGAAACGATATGATATAATTGTGGGGATTGCTCGAGGACTACTTTATCTCCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTAAAAACTAGTAACATTCTACTAGACAATGAATTGAACCCCAAAATTTCTGATTTTGGTGTATCCCGCATTGTTGAAGGAGATCATTTTGCAGTAACAACAAATGAAATTGTTGGGACAATTGGTTATATGTCCCCTGAGTATGCAGTAAATGGGCTTCTTTCCGTGAAGTCTGATGTGTTTAGCTTCGGAGTTATAGTGTTAGAGATATTAAGTGGAACCAAAAGTAATAACTTCAAAGTCAAACATCCAGATCATGACCATAATCTATTGGGGCAGGCATGGAGATTATGGAATGAAGAACGAGCTGTGGAATTCATGGATGTTAATTTAGACCTTACAACTATTCCATCAGAATTTATGAGCTGCCTGCAAGTTGGTCTCTTATGTGTTCAAAATTTACCCGAAGACAGACCAACTATGTCGTCTGTGGTTTTCATGTTGAGCAATGAAAGCATTGCACTAGGCCAACCAAAGAAGCCTGACTTCTTTGAAGAAAAGTTAGAGTATCGTGGGTACAGCGAGAAAGAGAGTTTTAGTAACAATGCTATGACTATAACATTGTTAGAAGCTCGAAATTAG 2469 0.3969 MKKVVIIIFALACLSILQKTSYAADVLTPTSSIKGGQELISAGQNFSLGFFTPGTSKSRYVGIWYKNILPQTIVWVANRDSPLNDTSGNLTVAADGNIVLFDGAGNRIWFTNSSRPIQEPIAKLLDSGNLVLIDGKNSDSDSYIWQSFDYPTDTMLPGLKLGWDKTSGLNRYLTSWKSANDPSPGNFTYRFDQKEFPELVIRQGMNITFRSGIWDGIRFNSDDWLSFNEITAFKPQLSVTRNEAVYWDEPGDRLSRFVMRDDGLLQRYIWDNKILKWTQMYEARKDFCDTYGACGANGICNIKDLPAYCDCLKGFIPNSQEEWDSFNWSGGCIRRTPLNCTEGDRFQKLSWVKLPMLLQFWTNNSMSLEECHVECLKNCSCTAYANSALNEGPHGCLLWFGNLIDIRLLITEEDAGGQLDLYVRLAASEIESTANASKRRKIALIISASSLALLLLCIILCLSKKYIKRRRTTTDLVAGHRNHNEDQAPPLFEIDTILAATNNFSIENKIGEGGFGPVYRGKLAHGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSVLGGCTQGEERMLVYEYMPNSSLDHFIFDPKQGKTLKWRKRYDIIVGIARGLLYLHQDSKLTIIHRDLKTSNILLDNELNPKISDFGVSRIVEGDHFAVTTNEIVGTIGYMSPEYAVNGLLSVKSDVFSFGVIVLEILSGTKSNNFKVKHPDHDHNLLGQAWRLWNEERAVEFMDVNLDLTTIPSEFMSCLQVGLLCVQNLPEDRPTMSSVVFMLSNESIALGQPKKPDFFEEKLEYRGYSEKESFSNNAMTITLLEARN* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0557 822 Gene3D Phosphorylase Kinase; domain 1 465 579 - -
Gso15g0557 822 SMART blect_4 30 151 IPR001480 -
Gso15g0557 822 Pfam D-mannose binding lectin 72 177 IPR001480 -
Gso15g0557 822 SMART ntp_6 341 425 IPR003609 -
Gso15g0557 822 SUPERFAMILY Protein kinase-like (PK-like) 487 777 IPR011009 -
Gso15g0557 822 Gene3D - 19 148 IPR036426 -
Gso15g0557 822 SMART serkin_6 504 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0557 822 ProSiteProfiles PAN/Apple domain profile. 340 426 IPR003609 -
Gso15g0557 822 ProSiteProfiles Protein kinase domain profile. 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0557 822 CDD STKc_IRAK 510 777 - -
Gso15g0557 822 Pfam Protein tyrosine and serine/threonine kinase 505 775 IPR001245 GO:0004672|GO:0006468
Gso15g0557 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gso15g0557 822 CDD B_lectin 30 151 IPR001480 -
Gso15g0557 822 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Gso15g0557 822 Gene3D Transferase(Phosphotransferase) domain 1 580 788 - -
Gso15g0557 822 CDD PAN_AP_plant 336 426 - -
Gso15g0557 822 PIRSF SRK 1 821 IPR024171 GO:0004674
Gso15g0557 822 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 8 818 - -
Gso15g0557 822 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 818 - -
Gso15g0557 822 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Gso15g0557 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Gso15g0557 822 Pfam PAN-like domain 340 406 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0557 Gso-Chr15 4937158 4941107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0557 424 793 Receptor kinase-like Gene Family AT4G38830 49.867 1.05e-110 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g0557 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0557 - - gmx:102669607 1648.25