Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0549 ATGAATAAAGCAACAATTGTTGAAGATGCTATCACCTACATTGAGAAGCTGCAAGACAAAGTCCAGAATCTCAGCCAAGAGCTACACCAAATGGAAGCAACTTCAGTGGAAACGGCAGAGACAAAAATAGTTGAAATTGATGCTGTGGAAGATATGAAGAATTGGGGGATACAGGAAGAGGTCAGAGTGGCGCAAATAAACGAGAATAAACTCTGGGTTAAGATCATTATTGAGAAGAAGAGGGGAAGATTCAACAGATTGATGCAGGCCCTCAATAATTTTGGCATTGAGCTTATTGACACCAATCTCACAACCACCAAAGGATCATTTCTGATTACAAGCTGCATAAAGTGCAAGAATGGTGAAAGATTTGAAATTCATCAAGCGAAGAATTTGTTGCAAGATGTTATCAACCACATATAG 423 0.3901 MNKATIVEDAITYIEKLQDKVQNLSQELHQMEATSVETAETKIVEIDAVEDMKNWGIQEEVRVAQINENKLWVKIIIEKKRGRFNRLMQALNNFGIELIDTNLTTTKGSFLITSCIKCKNGERFEIHQAKNLLQDVINHI* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0549 140 Gene3D - 1 37 IPR036638 GO:0046983
Gso15g0549 140 PANTHER TRANSCRIPTION FACTOR DYT1 1 140 - -
Gso15g0549 140 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 140 - -
Gso15g0549 140 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 34 IPR036638 GO:0046983
Gso15g0549 140 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0549 Gso-Chr15 4869804 4871310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0549 1 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 39.310 5.23e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0549 - - gmx:100793107 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0549 15 4869804 4871310 Gso11g2747 11 43378044 43379551 GST