Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0546 ATGCTTGAGGCTTGGGTTTCTCTCAAGAAGACACTTCAATGCAAACCACAGCCAAATCAAGTTCATGATCCAAAGATTACTAGGCAGCAAAAAGGTAATCAGAGAACAAAGTCAAGTAATCTAGAGAGTTCAAATACCAAAGATTTCATCCAAGGAAGCAAGAAGCACTTAAAAAAATCACTAAGTTATAGAGGGGACATTGACATCACTAGTCCCATAACCCATGAAATTGTTCTCGACAGCTCAAACAATGGAACTTGTCGATGTTGTCCTTGTCCTCAAAGCAATAACGGCAATAAAGGTTCGGAAGGTTCTCATAGAACACGAAGGTCAGCTACATCTTCAAAAATAACAATGACATATCCTGTTGATTACAATGAAGCAAATGTTTCCTCCAACACAAGGGCGTTGGTTCAGATGGATTCTGATGGTTGTTCCACATTGACATGTCATAAATGTCGCAAGAAAATGAAAAATCTTGATGCTGTAGAAGCACACCATATCTCCCAGCATTCAGTCACTGAACTTGAAGAAGATTCATCTAGACAGATAATAGAAACAATATGTGGAAGTGGAACAAGCTCTATTATTAATTCGGAAAACATGTTGGGGCAGATTGATTGCATTTTAAAGGTTCTGAATGTACCAAAAACCTTTGCTTGCTTTGAGGAATATAGAGAAAAGGTGAAGGATAACGCTGACAAACTACAGAAGAAGCATCCACGTTGTGTGGCTGATGGAAATGAGCTTTTAAGGTTCCATGGCACAACTATTGCATGCTCTCTTGGCACAAACAGTTCTAGCCTGTGCACTTTAGACTATTGTGGCATATGTCAAATCCTGCGAAATGGCTTCTCCACCAACAAGGAATTCCATGGTGCATTGGGGGTTTACACCACTTCCACAAGTGGGAAAGCCTTTGAATCCATTTCCATCATGACATCCCATGAGAGGCCATTTCCTAGAAAGTCTGTCATAGTGTGCAGAGTAATAGCTGGGAAAATTCATAGTCCTCTTGAAGAAGAAAGGGTTGATTCAGAGTTTGATTCATTGGCAGAAAAAATAAATGGTCATTCTTCAGATGCTGAGGAACTCTACGTGTTAAATCCCAAAGCCCTTCTCCCATGCTTTGTGGTGATCTACAAACATCAAACAGACAAGGTTAGGAGGATTTTAGGAGGTTCAGCTCAAGCATAA 1197 0.401 MLEAWVSLKKTLQCKPQPNQVHDPKITRQQKGNQRTKSSNLESSNTKDFIQGSKKHLKKSLSYRGDIDITSPITHEIVLDSSNNGTCRCCPCPQSNNGNKGSEGSHRTRRSATSSKITMTYPVDYNEANVSSNTRALVQMDSDGCSTLTCHKCRKKMKNLDAVEAHHISQHSVTELEEDSSRQIIETICGSGTSSIINSENMLGQIDCILKVLNVPKTFACFEEYREKVKDNADKLQKKHPRCVADGNELLRFHGTTIACSLGTNSSSLCTLDYCGICQILRNGFSTNKEFHGALGVYTTSTSGKAFESISIMTSHERPFPRKSVIVCRVIAGKIHSPLEEERVDSEFDSLAEKINGHSSDAEELYVLNPKALLPCFVVIYKHQTDKVRRILGGSAQA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0546 398 SUPERFAMILY ADP-ribosylation 177 386 - -
Gso15g0546 398 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 383 - -
Gso15g0546 398 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 383 - -
Gso15g0546 398 MobiDBLite consensus disorder prediction 15 53 - -
Gso15g0546 398 MobiDBLite consensus disorder prediction 15 48 - -
Gso15g0546 398 Gene3D - 149 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0546 Gso-Chr15 4854059 4856197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0546 4 382 C2H2 Transcription Factor Family AT5G54630 42.105 1.10e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0546 - - gmx:100792577 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0546 15 4854059 4856197 Gso11g3040 11 46275896 46278291 GST