Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0543 ATGGCTCAAAAACAAAAGCTGCGCCCTTCTCCTCTGGACGAGCCACCCACCGCTTCCTCTTCCGATTCCGAGGAAGAAGAGGAGCAACAACAACAACAACCATCCTCTCAGCAACACGAAGAAGAGGAAGAAGAAGTTTCCTCCGGAGAAGAAGAGGAAGCTTCCTCCGAAGAAGAGGAAGACGAAAATCTCCCCCCACCACCCATCTCCAAAAACCCTCCACCCCCTCCTCCCTCAAACCCTCAGCCCCAACCCACTTCCTCCGAATCCGAAACCGAATCGGGTTCCGAAACCGAATCAGAACCCCACCCCACTCCCGTTAAGGTCAAACCCCTAGCCTCCAAGCCCATGGACCAGGCCCAAAAGCCCAAAGCTCAACCCTCCCCGGCGCCGCCGCCGCCAAAATCGGCATCCAAGCGCCCCGCCGAGAACAACAACAACAACGCCCGTGTCGCCGACCCCAAACGCGCGAAGAAAAAAGCCACCGAATCTTCTTCTGCCGCCGCCATCTCCGACGACGAGATGGAGGAGGACGGGAAGAAGTCCGGCGATAACTCGAAGAAGTTTCAGAGACTGTGGAGCGAGGAGGACGAACTCGCCATTCTGAAGGGCGTGGTTGAGTTCACATCGAAAACAGGGCTGGACCCTCTTAAGTTCCCCAATGCCAACGCTTTCCACGATTTCATGAAGAAGTCGCTTCACGTGGAATTTTCCAGCAACCAGCTGAAGGAGAAGCTCCGAAGGCTCAAGAAGAAGTTTGAGACCCAGGCAGGAAAAGGGAAGAATGGAGATGCCCCTAAGTTTTCCAAACCGCACGATCAGAAATTCTTTGAATTGTCCAAAAAGGCTTGGGGAAGTGAGGATGGTGGTGTAGCCAATGGCTCCGTGGAGAAGCCCAAGTCCAATGGGAATGCTGCCAAGAGTCCGAATCCGAAGAAGAAGGAATCCGGTAGCAGGAATGTGGCTTCTGCTAAGAAACCGAAGCCTGAAACAAATCCGGAGCCGGCGCCGGTGCCGTCCTTGGAGTTTAAGGAGTCTGAAAGGATGGAGATTGATCAAAAGCCTGATGGTGGTGATGCATGTTTGTTTTTGAGCGAATTGGTTCGATACAAAGAGGGTGCCAATGTTTCTAGGCTGGATGAGGATGATGTGAAGAGGGGGTTGGAGTTGATTGAGGAATCAAAGAGGGCAGAGTTGAGGGGGAAGTGGAAGAAATTACATCATGCTGAGATGGAACTGTTTGCGAATCGCTCAGAACTGATTGGGGAGCAGACTAAGTTGATACTCGAGGCGCTTCGGTCATCCAATCATTAG 1314 0.5282 MAQKQKLRPSPLDEPPTASSSDSEEEEEQQQQQPSSQQHEEEEEEVSSGEEEEASSEEEEDENLPPPPISKNPPPPPPSNPQPQPTSSESETESGSETESEPHPTPVKVKPLASKPMDQAQKPKAQPSPAPPPPKSASKRPAENNNNNARVADPKRAKKKATESSSAAAISDDEMEEDGKKSGDNSKKFQRLWSEEDELAILKGVVEFTSKTGLDPLKFPNANAFHDFMKKSLHVEFSSNQLKEKLRRLKKKFETQAGKGKNGDAPKFSKPHDQKFFELSKKAWGSEDGGVANGSVEKPKSNGNAAKSPNPKKKESGSRNVASAKKPKPETNPEPAPVPSLEFKESERMEIDQKPDGGDACLFLSELVRYKEGANVSRLDEDDVKRGLELIEESKRAELRGKWKKLHHAEMELFANRSELIGEQTKLILEALRSSNH* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0543 437 MobiDBLite consensus disorder prediction 248 357 - -
Gso15g0543 437 Coils Coil 39 59 - -
Gso15g0543 437 MobiDBLite consensus disorder prediction 265 282 - -
Gso15g0543 437 MobiDBLite consensus disorder prediction 43 63 - -
Gso15g0543 437 MobiDBLite consensus disorder prediction 1 186 - -
Gso15g0543 437 Coils Coil 239 259 - -
Gso15g0543 437 MobiDBLite consensus disorder prediction 297 311 - -
Gso15g0543 437 MobiDBLite consensus disorder prediction 66 84 - -
Gso15g0543 437 PANTHER STOREKEEPER PROTEIN-LIKE 11 436 - -
Gso15g0543 437 MobiDBLite consensus disorder prediction 341 355 - -
Gso15g0543 437 Pfam Protein of unknown function, DUF573 189 285 IPR007592 GO:0006355
Gso15g0543 437 PANTHER BNAANNG10740D PROTEIN-RELATED 11 436 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0543 Gso-Chr15 4841672 4843361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0543 86 431 GeBP Transcription Factor Family AT1G61730 32.571 7.08e-33 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso15g0543 DUF573 1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0543 - - gmx:100791520 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0543 15 4841672 4843361 Gso11g2756 11 43427468 43429125 GST