Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0542 ATGGCTTCCCGCATCGAGAACAGGCCTCCTCGCATCCTCTCCAATAAAAAGGGGGCCACTGAAGAAGTTTTCTCCGACAAGCGTAGAAGGATTGGGTCGGAGAGAATGGAGAGACAGGGAGGCCGAGGCAGGGCTCCCTTGGGTGCTCTAAAGGCAGACGCTAATAATGATGGTGCCAGTGCCGAGGGCTCCGAGTGCAGCACCGTTGACTTCACCAAAGAGGAAGTAGAGGCGTTGCTGAATGAGAAGATGAACACGAAGGAGAATCGCTATGATAATAAGAAAAAAATGGACCAGATGGGTGATCTCATTAAACGGCTTAAACTCTGCCTTCGATGGTTTAAGAGAGTCGAAGAAGGCTATATCCAAGAGAAAGAGAAGCTTCAGACTGACCTAGAATCTGCTGAGAAGAAATGTCTGGATATTGAGAATGAGATGAAGATTAAGATTGCAGAGTTGGATGAGACTATATCTAATTTGAGGGCGACAATTTCCTCTTTAGAAGAGAGAATTGCAAAGGAAGAGTCGGATAAATTGGAAGCTATTGCTCGTTATAGAAAAGAACAGGAAGCCAGAAGTGCAGCTGAGCAGATGCAAGCTTCTGTTTCAACTGAGCTTGAGAGAGTTCGGGAAGAGAAATCAATTGCTGAGAAGAAGGCCATTTCAAATGAGGATTTGTACAAAAGATCACAAGAGTATAATATGAGTCTGCAACAGTACAATAGTCGCCTTCAGTCGGATCTTGAAATAACTAATGGGGCACATAAACGACTGGAGATGGAGAAAGCAACCATTGTTGAGAACCTTAGCAATGTGAGAGGCCACAACAAGGCATTGCAGGACCAGTTGGCATCTCTTAAAGCTTCACAGGATGAGGCTGCAAAGCAGAAAGAAATGTTAACAAATGAACTCAAATTCCTTCGGGAAGAATTGAAACAAATTAGAGATGATCGAGATCGCCAACAGCTACAAGTACAAACTTTGACTGGAGAAGTAGAAAAATACAAAGAATATACAGGGAAATCATGTGCGCAGTTGGATACCTTGACAATTAAAACAAATGCTCTTGAGGGGACATGTTCTTCCCAAAGGGACCAAATAAATATGCTGCAACAGCAGTTGATTGCTGAAAAGGAGAAGTCAAAGATGGCTGATTTATCTGCTTCAGAAACTAGAACAGTGTTTGAAGATCAGAAAAGAATTATACGTGAACTCCAGGAACGACTGGCAGAGAAAGAATTCCAAGTAATTGAAGGGGAGAAGTTAAGGAAAAAATTGCATAACACTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTCCGACCTTTGCTACCGGATGATGGTCCTGGAACAGATATGGTTGTTTCATATCCCACGTCAACCGAAGCTCTTGGCCGGGGTATTGAATTACTACAGAGCGGGCAGAAGTACCCTTTTACATTTGACAAGGTATTTAATCACGAGGCTTCTCAGCAAGATGTTTTCACTGAGATATCGCAGCTGGTACAAAGTGCGCTTGATGGGTACAAGGTCTGTATCTTTGCTTATGGACAGACAGGCTCAGGCAAAACCTATACAATGATGGGTAGGCCGGATGCCCCCGATCTGAAGGGGTTGATACCACGTTCTCTAGAACAGATATTCGAGATTAGTCAGTCCTTGAAGGATCAAGGATGGACCTTCAAAATGCAGGCTTCAGTATTGGAAATATATAATGAGACCATCAGAGATTTGTTATCATCAAATCGGTCAAGTGGTATTGACTCAACACGTACAGAAAACGGTGTTCCTGTTTCTGGAAAGCAGCCATACACTATTATGCACGATGCCAATGGAAACACACATGTTTCAGACCTCACTATAAGGAATGTTTCTAGTGCAAGTGAGATTTCATCCCTTCTGCAACAGGCAGCACAAAGCAGGTCTGTAGGAAGAACACACATGAATGAGCAGTCGTCACGAAGTCACTTTGTCTTTACTTTGCGTATATCTGGGACTAATGAGAACACTGACCAACAAGTGCAAGGTGTGTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTGTCGAGGAGTGGAGCAACCGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAACAAGAGCATGTACCCTTTAGGAATTCAAAATTGACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCCAAAACTTTGATGTTTGTGAACATCTCACCTGATCCATCTTCAACTGGAGAGTCACTTTGCTCTCTTCGATTTGCCGCTGGAGTGAATGCCTGCGAGATTGGTATTCCGCGGCGTCAGACATCCACACGGTCCTTTGATTCTCGTTTGAGCAACGGCTAA 2403 0.4382 MASRIENRPPRILSNKKGATEEVFSDKRRRIGSERMERQGGRGRAPLGALKADANNDGASAEGSECSTVDFTKEEVEALLNEKMNTKENRYDNKKKMDQMGDLIKRLKLCLRWFKRVEEGYIQEKEKLQTDLESAEKKCLDIENEMKIKIAELDETISNLRATISSLEERIAKEESDKLEAIARYRKEQEARSAAEQMQASVSTELERVREEKSIAEKKAISNEDLYKRSQEYNMSLQQYNSRLQSDLEITNGAHKRLEMEKATIVENLSNVRGHNKALQDQLASLKASQDEAAKQKEMLTNELKFLREELKQIRDDRDRQQLQVQTLTGEVEKYKEYTGKSCAQLDTLTIKTNALEGTCSSQRDQINMLQQQLIAEKEKSKMADLSASETRTVFEDQKRIIRELQERLAEKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGPGTDMVVSYPTSTEALGRGIELLQSGQKYPFTFDKVFNHEASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFEISQSLKDQGWTFKMQASVLEIYNETIRDLLSSNRSSGIDSTRTENGVPVSGKQPYTIMHDANGNTHVSDLTIRNVSSASEISSLLQQAAQSRSVGRTHMNEQSSRSHFVFTLRISGTNENTDQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKQEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAAGVNACEIGIPRRQTSTRSFDSRLSNG* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0542 800 Coils Coil 69 89 - -
Gso15g0542 800 MobiDBLite consensus disorder prediction 1 67 - -
Gso15g0542 800 Coils Coil 395 415 - -
Gso15g0542 800 MobiDBLite consensus disorder prediction 20 41 - -
Gso15g0542 800 Coils Coil 276 331 - -
Gso15g0542 800 PANTHER KINESIN-LIKE PROTEIN KLP-3 32 800 - -
Gso15g0542 800 PANTHER KINESIN-LIKE PROTEIN 32 800 - -
Gso15g0542 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 776 IPR027417 -
Gso15g0542 800 SMART kinesin_4 434 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 Coils Coil 118 184 - -
Gso15g0542 800 CDD KISc_C_terminal 434 781 - -
Gso15g0542 800 PRINTS Kinesin heavy chain signature 511 532 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 PRINTS Kinesin heavy chain signature 649 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 PRINTS Kinesin heavy chain signature 680 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 PRINTS Kinesin heavy chain signature 729 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 Gene3D Kinesin motor domain 372 781 IPR036961 -
Gso15g0542 800 ProSiteProfiles Kinesin motor domain profile. 436 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 Pfam Kinesin motor domain 442 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0542 800 ProSitePatterns Kinesin motor domain signature. 679 690 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0542 Gso-Chr15 4831917 4838477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0542 345 791 Calmodulin-binding Proteins AT5G65930 35.808 4.88e-76 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0542 K10405 - gmx:100818473 1520.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0542 15 4831917 4838477 Gso11g3045 11 46313685 46320007 GST
Gso7g1585 7 37625946 37642631 Gso15g0542 15 4831917 4838477 PCT
Gso8g0524 8 4844952 4852545 Gso15g0542 15 4831917 4838477 PCT
Gso15g0542 15 4831917 4838477 Gso7g1585 7 37625946 37642631 PCT
Gso15g0542 15 4831917 4838477 Gso8g0524 8 4844952 4852545 PCT