Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0510 ATGAGTTCCAAAGGTGTTGGTGAAGATTGCCTGGGATGGGCAGCAAGAGATGCATCCGGAGTTCTATCACCTTACAAATTCAGTCGCAGGACTCCTGGGAATGAAGATGTTCTTATTAAAATTACACACTGTGGTGTTTGCTTCGCCGATGTAGTTTGGACAAGGAATAAACATGGTGACTCAAAGTATCCTGTTGTGCCTGGTCACGAGATTGCTGGGATTGTGACAAAGGTTGGCTCCAATGTCCACCGTTTTAAGGTTGGTGACCATGTTGGAGTGGGGACTTATGTCAACTCATGTAGGGATTGTGAACATTGTAATGACAGAGAAGAAGTTCATTGTACCAAGGGATCTGTTTTCACTTTTAATGGTGTTGATTTTGATGGTACAATTACAAAAGGAGGATACTCCAGTTACATAGTAGTCCATGAGAGGTACTGCTTCACGATACCAAAATCCTATGCATTGGCTTCAGCAGCTCCTTTGCTTTGTGCTGGAATTACAGTTTATTCACCGATGGTGCGCCACAAGATGAATCAACCTGGTAAATCTCTTGGAGTGATTGGTCTTGGTGGCCTCGGTCATATGGCAGTGAAATTTGGAAAGGCATTTGGTTTGAGTGTGACAGTTTTCAGCACTAGCATATCCAAGAAAGAGGAGGCACTGAGCCTGCTTGGTGCAGACAAATTTGTTGTTTCATCTAATCAAGAGGAAATGACGGCATTGGCTAAATCGTTGGACTTTATAATCGACACAGCATCTGGTGATCACCCGTTTGATCCTTACATGTCACTGTTGAAGACATATGGTGTTTTTGTCCTAGTTGGTTTCCCTAGTCAAGTCAAATTCAGCCCTGCAAGCCTTAATATAGGATCAAAGACTGTAGCCGGAAGTGTTACAGGTGGTACAAAAGATATACAGGAGATGATTGACTTCTGTGCTGCAAACGAGATTCACCCAAATATAGAGGTAATTCCAATCGAGTATGCCAATGAAGCTCTTGAGAGGCTCATCAATAGGGACGTCAAGTACCGGTTTGTGATAGATATTGAGAACTCCCTGAAAGAAAAATAA 1074 0.4274 MSSKGVGEDCLGWAARDASGVLSPYKFSRRTPGNEDVLIKITHCGVCFADVVWTRNKHGDSKYPVVPGHEIAGIVTKVGSNVHRFKVGDHVGVGTYVNSCRDCEHCNDREEVHCTKGSVFTFNGVDFDGTITKGGYSSYIVVHERYCFTIPKSYALASAAPLLCAGITVYSPMVRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALSLLGADKFVVSSNQEEMTALAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLVGFPSQVKFSPASLNIGSKTVAGSVTGGTKDIQEMIDFCAANEIHPNIEVIPIEYANEALERLINRDVKYRFVIDIENSLKEK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0510 357 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Gso15g0510 357 Gene3D - 13 350 - -
Gso15g0510 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Gso15g0510 357 CDD CAD1 12 349 - -
Gso15g0510 357 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Gso15g0510 357 SUPERFAMILY GroES-like 16 183 IPR011032 -
Gso15g0510 357 Gene3D - 165 320 - -
Gso15g0510 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 318 IPR036291 -
Gso15g0510 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Gso15g0510 357 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Gso15g0510 357 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Gso15g0510 357 PANTHER - 2 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0510 Gso-Chr15 4571853 4574611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0510 2 355 Monolignol Biosynthesis Gene Families AT1G72680 74.011 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0510 K00083 - gmx:100807617 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0510 15 4571853 4574611 Gso11g2795 11 43720852 43723480 GST