Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0504 ATGGCAAATTCTCATTTATCAACACCTTCTGAGCTATTTTCAAGACAACATAAGCCCCCTAGGGTTCCAAATCTTATTGGGGGCAGTTTTCTGGACTCAAAATCGTTAACTTTCATTGATGTTATCAACCCTGCAACACAAGAGGTTGTTTCACAAGTTCCTTGCACCACAGATGAAGAGTTTAAAGCTGCGGTATCTGCAGCAAAGAAGGCATTTCCATCATGGCGAAAAACTCCAATCACAAAACGCCAACGTGTTATGCTGAAGTTCCAGGAGCTTATACGCAGAGATATGGATAAACTTGCCCTGAATGTGACCACTGAACAAGGAAAGACGTTAAAGGATGCACAAGGAGATGTTTTCCGTGGTTTAGAGGTGGTTGAACATGCTTGTGGGATGGCAACTCTACAAATGGGAGAATATGTTTCTGATGTATCAAGTGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTATGTGCTGGTATTTGTCCATTCAATTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAGTGGCAGTTACATGTGGCAACACCTTTATTCTAAAACCATCAGAGAAAGTTCCAGGTGCCTCTGTAATGCTTGCAGAATTGGCAATGGAAGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGACGATGATGACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATGCTAGAGCTGCAGCTAAAGGGAAACGTGTTCAGGCTAATATGGGGGCCAAAAATCATGCAGTTGTAATGCCTGATGCTAGTGTTGATGCTACTGTAAATGCTTTAGTTGCTGCAGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACTGTTGTTTTTGTTGGAGACTCAAAACTGTGGGAAAGTAAACTTGTGGAGCATGCCAAAGCTCTTAAAGTAAATGTTGGAACTGAACCTGATGCAGACCTTGGTCCAGTCATTAGCAAACAGGCAAAGGAGCGAATACACCGATTAATTCAATCTGGGGTTGAAAGTGGTGCCAGACTAGTTCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCACCGCCAACATGGAGTGCTACAAGGAGGAGATCTTTGGACCAGTTCTTCTTCTCACGGAGGCTGATAACTTGGAAGAGGCCATAAACATTATCAATGAAAACAAGTATGGAAACGGTGCTTCTATATTTACCACATCTGGTGTGGCTGCAAGGAAATTTCAGACCGAGATTGAGGCGGGGCAGGTGGGCATCAATGTTCCTATTCCAGTTCCTTTGCCCTTTTTTTCATTTACTGGCAACAAGGCATCATTTGCTGGCGATCTTAATTTCTATGGTAAGGCAGGGGTTAACTTTTATACACAGATCAAAACAGTAACCCAGCAGTGGAAGGATTCGGCCAGCAAAAGCAAGATTAATTTGGCTATGCCAACCTCTCAAAAATCTTTGGACTCTTATAAATCCTGTTCAACTATTGTCTTACATCCTTAG 1596 0.4236 MANSHLSTPSELFSRQHKPPRVPNLIGGSFLDSKSLTFIDVINPATQEVVSQVPCTTDEEFKAAVSAAKKAFPSWRKTPITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSDVSSGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKVPGASVMLAELAMEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYARAAAKGKRVQANMGAKNHAVVMPDASVDATVNALVAAGFGAAGQRCMALSTVVFVGDSKLWESKLVEHAKALKVNVGTEPDADLGPVISKQAKERIHRLIQSGVESGARLVLDGRNIVVPGYESGNFIGPTILSDVTANMECYKEEIFGPVLLLTEADNLEEAINIINENKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSASKSKINLAMPTSQKSLDSYKSCSTIVLHP* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0504 531 CDD ALDH_F6_MMSDH 22 498 IPR010061 GO:0004491
Gso15g0504 531 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 517 IPR010061 GO:0004491
Gso15g0504 531 MobiDBLite consensus disorder prediction 1 20 - -
Gso15g0504 531 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 292 303 IPR016160 GO:0016491
Gso15g0504 531 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
Gso15g0504 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 41 475 IPR016162 GO:0016491
Gso15g0504 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 467 IPR016163 GO:0016620
Gso15g0504 531 Pfam Aldehyde dehydrogenase family 31 494 IPR015590 GO:0016491
Gso15g0504 531 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 1 517 - -
Gso15g0504 531 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 24 498 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0504 Gso-Chr15 4539461 4546286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0504 1 482 Aldehyde Dehydrogenase Gene Family AT2G14170 81.743 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0504 K00140 - gmx:100783569 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0504 15 4539461 4546286 Gso15g0504 15 4539461 4546286 ECH