Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0495 ATGGATGGTCACGGAGGAGGAGGAGGAGGGAGCAGAGGAGAAGCGGAGCTCTGGCTTTACACAGCGAACAAGGTTTTAAGCGCACGTGACCTGCACGGGGCCCGCTCATTTGCGATCCGGGCTCGAGACTCCGACCCGAGATACGAGCCCACTGAGCTCCTTTTAGCGGTGATTGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCAACTGGACTGGTACGCTATTTTGCAAGTCCTCCGTTACACTCAGAACATCGACTACATCGCCGCCCAGTACCGCCGCCTCGCCACCCAACTCGACCCTCACCACAACCCCTTCGCCTTCGCCGCTCATGCCTTCACGCTCGTCCACGACGCGTGGACCGTACTCTCCAACCCAACTAAAAAGACTTTCTACGACAACCAACTCCGGCTCCTCACTCAACCCCCTCCTCCTCAGCCACCACCACCACCTCCCGCTCCTCCTGCCCCGGTGGCCTTCTTTCCTATTCAGCCGCCGCAACCGAACCTAAACCCCAACCCGATTCCGAACCTAGTCCCTCCAAGGGAAAGCCCTAGGCCTAGGCCTAGGGTAGAGGTGGAGCCGCCACCACCGGCACCGCCGCCGTCGAGTCAGCTGGACAATGCGACCGAATTGACTCGGGCGAGTGAGGCCGAGAGCGAAGGGGCGAGTTTCTGGACCGCGTGCCCTTACTGTTACGTTATGTACGAGTATCCGAAGGTGTACGAGGATTGTACTTTGCGGTGCCAGAATTGTCGGAGGGGGTTTCATGCGATGGTTGTACGTTCTCCGCCAAAAGATGGTACTTTTGGCTCGTTTTGCAGTTGGGGTTTTTTCCCTGTGGGTTTTTCTGGGGATTTTAAGGACATTAACGGGTCTTCTTCCAAGTGGAACCCTTTCTCCCCTTTGTTTCCTTGCGCCTTGAAGGGGGCCGAGCAGAATAGTAGGTACCAGAAGGGGCCTTGGGTTTTTTATGATGATGACGCGTCTGCGGAGTTCGTCGAGGCTGGTTCCGACACGACGGAAGATGATTCCGATGATGATGACTGGCGTGGCGGGAATCAGAAGGGGACCACGAGGAGGAGGAAAAGAAGGAAGAGGAGAAGCAATGCTGGTGGTGATGTTAGAAGGGTACCTACAATTGAGAGGCCTAGAAGACGGGTTCAGAATAGTGACGGTAATGACAGTGTGGGGAATGGTGAGGCTGTGGATGGTGGTGCCCTTGCCGTGCCGGTGGCACCGGAGTCTAGCAAGAAGGCTGTGGCGTTGGGTGGATCAAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTAAATGTTGAGTTTAGCAATGAGGTGGAGGAGCCTGTGCATGGAGCAGGTGAAGGGAATGGGAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGGCTGGATGAGTTCCTTAGTAGCTTGCCTATTCTCAATGTTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1494 0.5542 MDGHGGGGGGSRGEAELWLYTANKVLSARDLHGARSFAIRARDSDPRYEPTELLLAVIDTLMAGEARINDQLDWYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVHDAWTVLSNPTKKTFYDNQLRLLTQPPPPQPPPPPPAPPAPVAFFPIQPPQPNLNPNPIPNLVPPRESPRPRPRVEVEPPPPAPPPSSQLDNATELTRASEAESEGASFWTACPYCYVMYEYPKVYEDCTLRCQNCRRGFHAMVVRSPPKDGTFGSFCSWGFFPVGFSGDFKDINGSSSKWNPFSPLFPCALKGAEQNSRYQKGPWVFYDDDASAEFVEAGSDTTEDDSDDDDWRGGNQKGTTRRRKRRKRRSNAGGDVRRVPTIERPRRRVQNSDGNDSVGNGEAVDGGALAVPVAPESSKKAVALGGSRRRSERNLGKLDLNVEFSNEVEEPVHGAGEGNGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0495 497 SUPERFAMILY Chaperone J-domain 67 139 IPR036869 -
Gso15g0495 497 MobiDBLite consensus disorder prediction 142 186 - -
Gso15g0495 497 Pfam DnaJ domain 73 135 IPR001623 -
Gso15g0495 497 ProSiteProfiles dnaJ domain profile. 73 138 IPR001623 -
Gso15g0495 497 CDD DnaJ 73 127 IPR001623 -
Gso15g0495 497 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 8 497 - -
Gso15g0495 497 MobiDBLite consensus disorder prediction 359 373 - -
Gso15g0495 497 MobiDBLite consensus disorder prediction 338 413 - -
Gso15g0495 497 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 497 - -
Gso15g0495 497 MobiDBLite consensus disorder prediction 139 219 - -
Gso15g0495 497 Gene3D DnaJ domain 67 143 IPR036869 -
Gso15g0495 497 SMART dnaj_3 72 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0495 Gso-Chr15 4445561 4447532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0495 14 496 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.563 6.95e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0495 - - gmx:100778926 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0495 15 4445561 4447532 Gso11g2812 11 43857642 43859527 GST
Gso7g1538 7 37178631 37181956 Gso15g0495 15 4445561 4447532 PCT
Gso8g0571 8 5268836 5271902 Gso15g0495 15 4445561 4447532 PCT
Gso15g0495 15 4445561 4447532 Gso7g1538 7 37178631 37181956 PCT
Gso15g0495 15 4445561 4447532 Gso8g0571 8 5268836 5271902 PCT