Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0477 ATGGAGAGCTTTGCACTTTCAGCCTCAACCTCCTTCTCTCGCTTTTCCCAACTCCATCATCGTCCTCGCCCTGTCATCTCCAGATCCCAATCTCTCAGATCACCCATCACCATCTCCCAACGTTTCTCCTTCCCCTCCAAACCATCCTCCACCTTCAACTTCAACTTCAAATTCAACCGTTTCTCAAAACCCCATTACCCAATTCAAGCTTCTCCTTCATCATCATCATCACCACCACCACCACCACCACCACCACCACCACCACCACCTCTCCAGGGTGCAAAGCCCATCCCTTTCATTATCTCCATATCCATCGGCCTCATTGTTCGCTTCTTCGTTCCCAAACCCGTCGAAGTCACCCCCGAGGCCTGGCAGCTCCTCTCCATTTTCCTCTCCACTATCGCGGGCCTTGTTTTGAGCCCGTTGCCCGTGGGGGCGTGGGCCTTTCTGGGCCTCACGGCCTCCGTGGTCACCAAAACTCTCACCTTTACAGCGGCCTTCAGCGCCTTCACGAATGAAGTGATTTGGCTTATTGTGATTTCGTTCTTCTTTGCTCGCGGATTCGTGAAGACTGGGTTGGGGGATAGAATTGCGACGTACTTCGTGAAGTGGATGGGAAAGAGCACTCTGGGGCTGTCTTATGGGCTCACATTCAGTGAAGTGCTTATTGCGCCGGCAATGCCTAGCACCACCGCAAGGGCTGGTGGTGTGTTCTTGCCGATTATTAAGTCACTCTCACTCTCTGCTGGCAGTGAACCCGCAAGTCCCACATCTAAGAAACTCGGGGCTTACCTCATTCAGAACCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAATCTGCTGTGTCTCAAATTAGCAGAGGAGCTTGGGGTGATAGTTCCAAACCCATGGGTTACTTGGTTTAAGGCGGCTAGTTTACCTGCTGTTGTTTGTCTTCTTCTTACGCCATTGATTTTATACAAGCTCTATCCCCCTGAAATCAAAGACACACCAGAGGCTCCTGCCCTGGCTGCCAAGAAACTGGAAAGTATGGGCCCTGTCACTAAAAATGAATGGATTATGGTTGGCACAATGCTTCTTGCAGTGTCTTTGTGGATCTTTGGAGACACTATTGGTATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTCCTATTAGGAGTCCTTGACTGGAATGACTGTTTGAATGAAAAATCAGCATGGGATACCTTAGCTTGGTTTGCCATTCTGGTAGGTATGGCAAGCCAGTTGACAAACCTTGGTATTGTGAACTGGATGTCTGATTATGTGGCCCACAACCTTCGGTCATTCTCTTTAAGCTGGCCGGCCTCACTAGCTGTTCTTCAGGCAGCGTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGAGCTTTATACTCAGCATTTCTTGCCATGCATAGGGCAGCTGGGGTTCCTGGTGTTCTGGCAGCGCTTGCTTTAGGTTATAATACAAATCTTTTTGGTGCAATAACACACTATAGTAGCGGCCAGGCTGCTGTATACTATGGAGCTGGTTATGTAGACCTTCCGGATATCTTCAAAATGGGGTTCATCATGGCTTTTATAAATGCTATCATCTGGGGAGGTGTTGGCTCTGTCTGGTGGAAATTTTTGGGATTGTATTGA 1692 0.4858 MESFALSASTSFSRFSQLHHRPRPVISRSQSLRSPITISQRFSFPSKPSSTFNFNFKFNRFSKPHYPIQASPSSSSSPPPPPPPPPPPPPLQGAKPIPFIISISIGLIVRFFVPKPVEVTPEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTASVVTKTLTFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPASPTSKKLGAYLIQNQFQSAGNSSALFLTAAAQNLLCLKLAEELGVIVPNPWVTWFKAASLPAVVCLLLTPLILYKLYPPEIKDTPEAPALAAKKLESMGPVTKNEWIMVGTMLLAVSLWIFGDTIGIASAVAAMIGLSILLLLGVLDWNDCLNEKSAWDTLAWFAILVGMASQLTNLGIVNWMSDYVAHNLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGVLAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKMGFIMAFINAIIWGGVGSVWWKFLGLY* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0477 563 PANTHER DICARBOXYLIC ACID TRANSPORTER2 60 563 - -
Gso15g0477 563 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 60 563 IPR030676 -
Gso15g0477 563 MobiDBLite consensus disorder prediction 73 91 - -
Gso15g0477 563 Pfam Sodium:sulfate symporter transmembrane region 100 562 IPR001898 GO:0016020|GO:0022857|GO:0055085
Gso15g0477 563 MobiDBLite consensus disorder prediction 68 91 - -
Gso15g0477 563 SUPERFAMILY Formin homology 2 domain (FH2 domain) 80 89 - -
Gso15g0477 563 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 115 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0477 Gso-Chr15 4345014 4348725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0477 1 563 Antiporters AT5G64290 75.395 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0477 - - gmx:100776794 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0477 15 4345014 4348725 Gso8g1470 8 14308497 14312434 GST