Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0461 ATGGATTGTTTCTGTTGCTTCAACAATCAGGCGGTACGCACTTCATGTAGCTCTGGCAAGGGCAAGAGCCATCAGGGCTCAGTTAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATCGTCAAGCTTGTAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCTGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCAGCCAGTTCCATCATTAAAGCCTATGAGACAACAGATCAGACCATTCTTTCTCATAGTTCTGATTTGGGGCAAGGAGGATCGACTGCAGTGACTGCAATTCTTATTAATAATCAGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTTTGTCAAGGAGAGGGGTGGCTGAACAGATGACTATTGATCATGAGCCCAATACCGAGAGGGGCATCATTGAGAACAAAGGTGGCTTTGTCTCAAACATGCCAGGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATCTAAAATCACACTTACGATCTGATCCTGATATACGATATGTTGATATTGACCTAGATGCTGAGCTTTTGATACTTGCCAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCACGAAGGATAAAAGATCCACAAAAGGCAGCTAAACAACTAGTTGTCGAGTCATTGAACAGAGAGAGTAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGATGA 837 0.4289 MDCFCCFNNQAVRTSCSSGKGKSHQGSVKYGFSLVKGKANHPMEDYHVAKIVKLVGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPASSIIKAYETTDQTILSHSSDLGQGGSTAVTAILINNQKLWVANVGDSRAVLSRRGVAEQMTIDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRYVDIDLDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLVVESLNRESKDDISCIVVRFKG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0461 278 ProSiteProfiles PPM-type phosphatase domain profile. 29 276 IPR001932 -
Gso15g0461 278 SMART PP2C_4 25 274 IPR001932 -
Gso15g0461 278 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 7 277 - -
Gso15g0461 278 SUPERFAMILY PP2C-like 25 277 IPR036457 -
Gso15g0461 278 SMART PP2C_SIG_2 40 276 IPR001932 -
Gso15g0461 278 PANTHER PROTEIN PHOSPHATASE 2C 7 277 IPR015655 GO:0004722|GO:0006470
Gso15g0461 278 CDD PP2Cc 28 276 IPR001932 -
Gso15g0461 278 Pfam Protein phosphatase 2C 39 269 IPR001932 -
Gso15g0461 278 Gene3D - 24 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0461 Gso-Chr15 4219478 4224480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0461 1 277 PP2C-type Phosphatase Gene Family AT1G22280 68.293 2.16e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0461 K17506 - gmx:102667117 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0461 15 4219478 4224480 Gso8g1482 8 14414013 14418825 GST
Gso5g0994 5 32842650 32850872 Gso15g0461 15 4219478 4224480 PCT
Gso8g0594 8 5531424 5539630 Gso15g0461 15 4219478 4224480 PCT
Gso15g0461 15 4219478 4224480 Gso5g0994 5 32842650 32850872 PCT
Gso15g0461 15 4219478 4224480 Gso8g0594 8 5531424 5539630 PCT