Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0459 ATGTCTTTTTATCTTTCAATTCCGATCGCTGTGGATTCTTCGTCGTCTTTGACGGTGACGCAGATGGCGCTTTTCAAATCTCTGGAGCAGAAGCACCACCGTCATTTCGTAAGAGGCAGAGTCAGTGTTATTAGACCACTTCATCGCCGCCTCAACTCCGTTACGCCTCTGCGGTGCTCTTCCTCCGGCGACGACGCCACCATTACTCTCCACGTTGGGGGAATGATGTGCGAGGGATGTGCAAATAGCGTCAAAAAAATTATAGAAAGCCGACCACAAGTGCTATCTGCTCATGTAAATTTGACATCCGAGACAGCAACCGTTTCCCCTGTGCCTGAACAAAAAACTGCACCAGATGGCCTAAAGCAATTGGGGGAGGAACTTGCGCAGCATTTAACTACATGTGGTTTTACTTCTACCCTTCGAGATCAAGAAGATAGCAGCTGA 447 0.4832 MSFYLSIPIAVDSSSSLTVTQMALFKSLEQKHHRHFVRGRVSVIRPLHRRLNSVTPLRCSSSGDDATITLHVGGMMCEGCANSVKKIIESRPQVLSAHVNLTSETATVSPVPEQKTAPDGLKQLGEELAQHLTTCGFTSTLRDQEDSS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0459 148 Gene3D - 64 145 - -
Gso15g0459 148 Pfam Heavy-metal-associated domain 69 126 IPR006121 GO:0046872
Gso15g0459 148 ProSitePatterns Heavy-metal-associated domain. 72 101 IPR017969 GO:0046872
Gso15g0459 148 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 56 140 - -
Gso15g0459 148 PANTHER ATP7, ISOFORM B 56 140 - -
Gso15g0459 148 ProSiteProfiles Heavy-metal-associated domain profile. 67 141 IPR006121 GO:0046872
Gso15g0459 148 SUPERFAMILY HMA, heavy metal-associated domain 63 142 IPR036163 GO:0046872
Gso15g0459 148 CDD HMA 69 128 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0459 Gso-Chr15 4197889 4201629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0459 68 142 Primary Pumps ATPases AT4G33520 68.000 4.26e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0459 - K17686 gmx:100527143 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0459 15 4197889 4201629 Gso8g1484 8 14445171 14447425 GST