LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g0458	ATGGCCGAGGAGATCAATGGCGGAACGTCGATGGACTCCACCGAATCGCGGTGGGTTATACAGGACGACGACGAGGACGCGTCGGATTTAGAGAACTTCGATGCGGATTTGAGATTGGGGCGGCACGGTGGCGTGGTGGATTCGGAGGAGGAAGAGGATAACGCGGAACAGAGACTGATTCGCACTGGTCCTCGCATCGATTCCTTCGACGTCGAGGCCCTTGAAGTTCCCGGTGCTCATAGAAGTGACTATGAGGACATCAGTGTGGGTAAGAAAATTGTATTGGCTTTTCAGACACTTGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCTTTATCACTTGTCTTGTACACTTTAATCTTGTTTCCTTTATTGAAGTATGTCCTGGTGGTTCTGTGGGCCAATGATGACGGTGAAGGTGGTACTTTTGCCTTGTACTCCTTGATCTGTCGTCATGCTAAGGTGAGTCTTCTCCCCAATCAGTTACCATCCGATGCCCGTATATCAAGCTTTAGGCTGAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGAATTCTCTGGCTCTGAAGAAGACTCTACTAATATTAGTTCTTGCTGGTACTTCAATGGTGATTGCTAACGGTGTTGTTACGCCAGCAATGTCAGTTATGTCATCTGTTGGTGGTTTAAAAGTTGGGGTAGATGCAATCAAGAAAGATGAAGTGGTGATGATTTCGGTTGCCTGTCTTATCATTTTGTTCAGTGTACAAAAGTATGGAACTAGTAAAATGGGACTTGCTGTAGGACCTGCTTTGTTCTTATGGTTTTGTTCTCTTGCGGGCATCGGGATATATAATCTTGTCAAATATGACAATAGTGTCTTGAGGGCATTTAATCCGATTCACATCTACTATTTCTTCAAGAGGAACTCAACTAATGCATGGTATTCTCTAGGGGGTTGCCTTCTGAGTGCAACTGGTTCTGAAGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACGCTCAGTTCAGCTTTCATTTGTCTTTCTTGTTTTGCCGTGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAACATTGCTGCACTTATTGCGAGTCGGGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTCGGTTGTTTCCCTCGTCTTAAAATCATTCATACTTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTGATAAACTGGTTCCTCTTGGCTCTTTCTCTGGTGCTTGTCTGCACTATATCTAGCATTGACGAGATTGGAAATGCCTATGGCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGATTCTTATATGGCAGATACACATCATCATAGTGCTGAGTTTCGTGGTACTCTTCTTGGGATTGGAATTAACTTTTTTTTCGTCTGTCCTGTGGAGTGTGACAGATGGAAGTTGGATTATACTGGTCTTTGCCATAATAATGTTTCTAATAATGTACGTATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAACGGATTTGATGCGAGAATTAGGTTGTAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTTTATAATGAGTTGGTAAAAGGAATACCGGCAATTTTTGGTCATTTTCTGACCACACTTCCTGCAATACACTCCATGATTATATTTGTGAGTATCAAGTATGTTCCAGTTCCTATGGTGCTGCAAAGTGAAAGGTTTCTTTTTCGGCGAGTCTGCCCCAAAAGCTACCATATATTTCGTTGTATCGCCAGGTATGGTTACAAAGATGTTCGGAAAGAAAATCATCAGACTTTTGAGCAGCTGCTGATTGAGAGTCTAGAGAAATTTATACGTCGTGAGGCTCAGGAGAGGTCACTGGAGAGTGATGGGGATGATGATACTGATTCAGAGGATGAGTACCCTAATTCTAGGGTTCTCATAGCTCCCAATGGGAGCGTTTACTCACTTGGTGTTCCTCTTCTTGCTGATTTTAAGGGTACAAGCAACCCCATTTTAGAAGCAAGCACATCAGACGTGATAAGCCCGGTATCCACTGATCCCCTGGTGTTTGATGCTGAGCAGAGCCTTGAGAGTGAGTTATATTTTATTCACAAGGCTAAAGAATCTGGTGTTGTGTATCTTCTGGGTCATGGGGATATAAGAGCAAGGAAGGACTCGTGGTTTATCAAGAAGTTAGTTATAAACTATTTTTATGCCTTTTTGAGAAAGAACTGCAGAAGGGGGATCACAACTTTAAGTGTACCACACTCACATCTGATGCAAGTTAGCATGACATACATGGTCTGA	2526	0.4272	MAEEINGGTSMDSTESRWVIQDDDEDASDLENFDADLRLGRHGGVVDSEEEEDNAEQRLIRTGPRIDSFDVEALEVPGAHRSDYEDISVGKKIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILFPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLENSLALKKTLLILVLAGTSMVIANGVVTPAMSVMSSVGGLKVGVDAIKKDEVVMISVACLIILFSVQKYGTSKMGLAVGPALFLWFCSLAGIGIYNLVKYDNSVLRAFNPIHIYYFFKRNSTNAWYSLGGCLLSATGSEAMFADLCYFSVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLALSLVLVCTISSIDEIGNAYGIAELGVMMMTTILVTLVMILIWQIHIIIVLSFVVLFLGLELTFFSSVLWSVTDGSWIILVFAIIMFLIMYVWNYGSNLKYETEVKQKLSTDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPMVLQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSEDEYPNSRVLIAPNGSVYSLGVPLLADFKGTSNPILEASTSDVISPVSTDPLVFDAEQSLESELYFIHKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV*	842

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g0458	841	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	14	840	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Gso15g0458	841	PANTHER	POTASSIUM TRANSPORTER	14	840	-	-
	Gso15g0458	841	MobiDBLite	consensus disorder prediction	1	25	-	-
	Gso15g0458	841	Pfam	K+ potassium transporter	96	669	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Gso15g0458	841	TIGRFAM	kup: potassium uptake protein	95	840	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g0458	Gso-Chr15	4192382	4197005	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g0458	9	841	Inorganic Solute Cotransporters	AT5G09400	79.475	0.0	1322

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g0458	-		-	gmx:100788008	1605.11

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso15g0458	15	4192382	4197005	Gso8g1485	8	14451212	14457129	GST
	Gso5g0998	5	32941404	32947078	Gso15g0458	15	4192382	4197005	PCT
	Gso8g0600	8	5595047	5600848	Gso15g0458	15	4192382	4197005	PCT
	Gso15g0458	15	4192382	4197005	Gso5g0998	5	32941404	32947078	PCT
	Gso15g0458	15	4192382	4197005	Gso8g0600	8	5595047	5600848	PCT

Showing 1 to 5 of 5 entries