Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0454 ATGAATATTTCAATTATTCTCAATGTGGTTCTTCTGCTTGCAATTATATTGTTATTGCTGCTTTACTACAACACAACCAGAAAGCTCAATAAAATAGTGAAGCTAGGGCAGATTCCCACAGTCAAAGAAAAAGAGAGTGATGATGTGGAAATCAGTGTTGACAAGAAGATAGAAATAGGAGAGGGGACAAAGATGGTGACAGTGGAAGAGAGAAAGGAACTCGTGTTCTTTGATGATAAGGCAAAATTTCAAATGGGTGAACTTCTTAGAGCTTCTGCTGAGGCACTGGGTCACGGGATCTTGGGAAATAGTTATAAGGCTATGCTGAATGATGGATCTACCATTGTTGTAAAGAGGCTAAGGGACTTAAAACCACTCTCTAAGGAGGAATTTGCAAAGATATTAAATGCGATTGCTGAGATGAAGCACCCCAATTTGTTGCCTTTGCTTGCTTACTACCATTCCAGAGATGAGAAGCTTATGCTCTACACATACGCAGAGAGGGGAAATCTTTTCTCCCGGCTTCATGATGGTAGAGGTGGAAACCGAGTCCCATTCAGTTGGAACTCAAGATTGTCAGTTGCAAGAGGAGTGGCTCGAGCATTGGTGTACCTGCACCTCAACAGCAAGTTCCACAACGTTGTCCCACACGGCAACTTGCGGTCTTCAAACGTATTATTCGATGAAAACGATGCAGTTCTTGTCTCTGACTTCGGTCTTGCATCCTTGATAGCACAACCAATTGCAGCTCAGCACATGGTTGTCTACAAATCACCTGAATACGGGTATGCAAGAAGGGTGACAGTGCAATCCGATGTTTGGAGCTATGGATCACTTCTGATAGAGCTTCTAACTGGGAAAGTGTCTGTGTGCTCAGCTCCACCAGGGACCAATGGGGTGGATCTATGCAGTTGGGTTCACAGAGCTGTAAGGGAGGAATGGACTGCTGAGATATTTGACAAAGAAATTTGTGGCCAAAAGAGTGCACTTCCTGGGATGCTGAGGTTGCTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCTGAAAAGCGTCCTGAGATGAAGGAGGTGATGAGGGAAGTGGAGAAAATACAGCAGGCACCCGAAGATGATGATGATGGATCTGTGGATAGGTCCCTAACTGATGATTCCCTTTCAACCAGCACTTCTATCATTGGAGATGAAAGATAG 1191 0.4433 MNISIILNVVLLLAIILLLLLYYNTTRKLNKIVKLGQIPTVKEKESDDVEISVDKKIEIGEGTKMVTVEERKELVFFDDKAKFQMGELLRASAEALGHGILGNSYKAMLNDGSTIVVKRLRDLKPLSKEEFAKILNAIAEMKHPNLLPLLAYYHSRDEKLMLYTYAERGNLFSRLHDGRGGNRVPFSWNSRLSVARGVARALVYLHLNSKFHNVVPHGNLRSSNVLFDENDAVLVSDFGLASLIAQPIAAQHMVVYKSPEYGYARRVTVQSDVWSYGSLLIELLTGKVSVCSAPPGTNGVDLCSWVHRAVREEWTAEIFDKEICGQKSALPGMLRLLQIAMRCIERFPEKRPEMKEVMREVEKIQQAPEDDDDGSVDRSLTDDSLSTSTSIIGDER* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0454 396 MobiDBLite consensus disorder prediction 355 396 - -
Gso15g0454 396 Gene3D Transferase(Phosphotransferase) domain 1 167 384 - -
Gso15g0454 396 MobiDBLite consensus disorder prediction 355 374 - -
Gso15g0454 396 Gene3D Phosphorylase Kinase; domain 1 58 165 - -
Gso15g0454 396 PANTHER OS05G0588300 PROTEIN 3 392 - -
Gso15g0454 396 PANTHER RECEPTOR-LIKE KINASE 3 392 - -
Gso15g0454 396 ProSiteProfiles Protein kinase domain profile. 90 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0454 396 SUPERFAMILY Protein kinase-like (PK-like) 94 367 IPR011009 -
Gso15g0454 396 MobiDBLite consensus disorder prediction 380 396 - -
Gso15g0454 396 Pfam Protein tyrosine and serine/threonine kinase 94 360 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0454 Gso-Chr15 4156213 4158442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0454 55 372 Receptor kinase-like Gene Family AT2G36570 40.059 6.86e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso15g0454 PK_Tyr_Ser-Thr 6.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0454 - - gmx:100816006 740.339