Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0450 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCACTGCTATTGGAGGCAAAGTTGGTGCTGCTGTTACTGTTAATCCCAGAAGACTCATTGTGGTAGCTGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGTGTTAGAGGTGGTGGCAATCTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGTTTTGATCCACTAGGCCTTGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGGAGGTGGGCAATGGCTGCAGTTCTAGGAATCTTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCAAATGCAATTGCTCCTTTCTCCTTTGGTACTCTTCTGGGAACCCAGTTGATCCTCATGGGGTGGGTTGAGAGCAAGAGATGGGTGGATTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCCACTGGTGAGCAAGGCTACCCAGGAGGCAAATTCTTTGACCCTTTGAGCTTTGCTGGCACTATCAAGGATGGAGTTTACATTCCGGATACAGAGAAGCTGGAAAGATTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGCTGATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 783 0.5045 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLSFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0450 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
Gso15g0450 260 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 260 - -
Gso15g0450 260 SUPERFAMILY Chlorophyll a-b binding protein 69 260 - -
Gso15g0450 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Gso15g0450 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0450 Gso-Chr15 4129214 4130634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0450 1 260 Chloroplast and Mitochondria Gene Families AT1G15820 81.226 3.96e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0450 K08917 - gmx:100527463 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0450 15 4129214 4130634 Gso8g1492 8 14513294 14515151 GST
Gso8g0613 8 5689546 5690876 Gso15g0450 15 4129214 4130634 PCT
Gso15g0450 15 4129214 4130634 Gso8g0613 8 5689546 5690876 PCT