Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0444 ATGGAGAGAGTGACTTCATCTTTTATGGGTTCCTTTTTTTTTTGGGCAATTTTGGTGCTTGATTTGGTACTTAAGGCTTCTGGCAATCAGGAAGGTGATGCCCTGAATGCATTGAAGAGCAACTTGCAAGATCCTAACAACGTTCTTCAAAGCTGGGATGCTACCCTTGTCAATCCCTGCACGTGGTTTCATGTTACATGCAACAGTGATAACAGTGTGACCCGTGTTGATCTTGGAAATGCAGATCTTTCTGGTCAACTGGTTTCACAACTTGGTCAACTTACAAATTTGCAGTACTTGGAACTTTATAGTAATAAGATAACTGGAAAAATTCCAGATGAGCTTGGGAACTTAACAAATTTGGTGAGCTTGGATCTTTACTTGAACACTTTAAATGGTCCCATACCGACTACTTTGGGCAAACTTGCAAAACTACGTTTCCTGCGTCTCAATAATAATAGCTTGACAGGAGGCATACCCATATCTTTGACAAATGTTTCTTCACTGCAAGTTCTTGATCTCTCAAATAACCATCTAAAAGGGGAAATCCCAGTGAATGGTTCATTTTCATTATTTACCCCCATCAGTTATCAAAACAATCCTGGCTTGATACAACCAAAATACACTCCATCTCCAGTTTCTCCAACACCACCACCAGCTTCTTCAGGTAACAGTAATACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGCTTATTGGCGAAGAAGGAAACCTCAGGATCATTTCTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCTCTGCGTGAGTTGCAAGTTGCAACAGATAACTTTAGTAACAAACACATTCTGGGTAGAGGTGGATTTGGAAAGGTTTATAAAGGACGCTTAGCTGACGGATCTCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGCACGCAGGGTGGAGAGCTGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGTAATTTGCTTCGGCTTCGTGGTTTTTGTATGACACCTACTGAGCGGTTGCTTGTGTATCCTTACATGGCTAACGGAAGTGTAGCATCATGTTTACGAGAACGTCAAGAATCCCAACCGCCACTTGGCTGGCCAGAACGGAAGCGTATTGCACTGGGATCTGCAAGGGGGCTTGCTTATTTGCATGATCATTGTGACCCTAAGATTATTCACCGTGATGTCAAAGCAGCAAATATATTGTTGGACGAGGAATTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCTAAACTTATGGATTATAAAGATACTCATGTCACTACTGCTGTACGTGGAACAATTGGACATATAGCACCAGAGTACCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAAAGGGCTTTTGATCTAGCTCGACTTGCCAATGATGATGATGTCATGTTGCTCGATTGGGTTAAAGGACTTCTCAAAGACAGGAAATTGGAAACACTGGTAGATGCAGATTTACAGGGCAGCTATAATGATGAGGAGGTAGAGCAGTTAATCCAAGTGGCCTTACTATGCACACAAGGCTCTCCTATGGAAAGACCTAAGATGTCTGAGGTGGTCAGAATGCTAGAAGGTGATGGTTTGGCTGAGAAATGGGAGCAATGGCAGAAAGACGAAACATTCCGGCAAGACTTCAATAACAACATACATCACCCTAATGCAAATTGGATAGTAGATTCAACTTCCCATATCCAGGCAGATGAACTATCAGGTCCTAGATGA 1851 0.4241 MERVTSSFMGSFFFWAILVLDLVLKASGNQEGDALNALKSNLQDPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNADLSGQLVSQLGQLTNLQYLELYSNKITGKIPDELGNLTNLVSLDLYLNTLNGPIPTTLGKLAKLRFLRLNNNSLTGGIPISLTNVSSLQVLDLSNNHLKGEIPVNGSFSLFTPISYQNNPGLIQPKYTPSPVSPTPPPASSGNSNTGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERQESQPPLGWPERKRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDRKLETLVDADLQGSYNDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKDETFRQDFNNNIHHPNANWIVDSTSHIQADELSGPR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0444 616 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Gso15g0444 616 ProSiteProfiles Protein kinase domain profile. 292 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0444 616 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Gso15g0444 616 MobiDBLite consensus disorder prediction 205 225 - -
Gso15g0444 616 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Gso15g0444 616 Pfam Protein kinase domain 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0444 616 PANTHER BNAA08G11770D PROTEIN 11 616 IPR031048 GO:0004675|GO:0005102|GO:0006468
Gso15g0444 616 SUPERFAMILY L domain-like 30 194 - -
Gso15g0444 616 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Gso15g0444 616 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 616 - -
Gso15g0444 616 Gene3D Phosphorylase Kinase; domain 1 261 368 - -
Gso15g0444 616 Gene3D Ribonuclease Inhibitor 27 211 IPR032675 -
Gso15g0444 616 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0444 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0444 Gso-Chr15 4051150 4058081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0444 1 616 Receptor kinase-like Gene Family AT4G33430 78.496 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso15g0444 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0444 K13416 - gmx:100800522 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0444 15 4051150 4058081 Gso8g1498 8 14579599 14586687 GST
Gso5g1016 5 33137308 33144535 Gso15g0444 15 4051150 4058081 PCT
Gso15g0444 15 4051150 4058081 Gso5g1016 5 33137308 33144535 PCT