Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0429 ATGAAGGATGTGTGCAATGTGGTGCAGGGGTTGAAACCTGTGCTGCTAATGGTAATGGTGCAGATAACATTTGCAGGGGTCAATGTCTTCTACAAGCTCGCCGTAAACGATGGCATGAGCTTGAGGGTCGTTGTTGCCTACCGCTTTGTATTCGCCACAGTTTTCATAGCTCCACTTGCTCTCATCGTTGAAAGGAAGAAGAGGACAAAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGGGGATCATTAGCTCAAAATTTCTACTTGCAAGCCCTGGCTTTAACTTCTGCAACGTTTGCATCTGCAATGTCTAACCTTTTACCAGGCATAACATTTATCTTGGCCGTTTGCTTCGGTTTAGAAAGATTAAATTTGACAACAGCAGCAGGGAAGGCCAAAATAGTGGGTACATTAATTGGAATTGGTGGAGCAATGGTACTTACTTTCGTTAAAGGTGAGGAAATCGAATTGGGGTCCTTTCATTTGAACCTTTTGCATCCCCCAAACGGAACGCACGCACACGCTACTACCGGGGCTGATACCCTCTTGGGTTCTCTGTGCGCCCTGGGTAGTGGCATCAGCTATGCATTGTGGCTCATCATTCAGGCCAAGATGATTGAAAGATACCCTAGTCCTTACTCAAGCACGGCGTTGATGTCACTTTGGGGGTCACTGCTGTCCATTGTGTTTGCACTTTGCGTTGAGAGGGACTGGAGCCAGTGGAGGTTGGGTTGGAATATTAGGCTTTTGACTGCAGCATATACGGGTATTGTGGTTTCTGGGGTGATGGTGGTTGTGATTTCATGGTGCGTCCACATGAGAGGCCCATTGTTTGTCTCTGTTTTTAGCCCCCTGATGCTCGTGATGGTGGCCTTGGCTGGTCCTACGATGTTGAACGAGAAGCTACACCTTGGATGCGCTATTGGAACAGTGCTGATTGTGTGTGGCTTATATGTGGTATTATGGGGTAAAAGTAAAGAGATGAAGAAGAAGAATCAATTAGTGCCAGCACAAAGCCCCCATGACAATGAATCTAATACGGTCGAAATAGTGGTGAGGTCTGCACAAGAAGATAAAAGCAACCGAAATAAAACCCATGAAATTGTTGCAAAAGTAGGTAGGGATAATAACGATTCATTGGCGGATGGACACCAAGAGCATTGCTCTTGTTCACATGAACAAAATCAGGGAAACAACGGAGGAGAAGAAGAAAATTCTAATGCTTCACATGCCCAAGTTTTTAACATATGA 1269 0.4531 MKDVCNVVQGLKPVLLMVMVQITFAGVNVFYKLAVNDGMSLRVVVAYRFVFATVFIAPLALIVERKKRTKMTWTVLFQSFLCGLFGGSLAQNFYLQALALTSATFASAMSNLLPGITFILAVCFGLERLNLTTAAGKAKIVGTLIGIGGAMVLTFVKGEEIELGSFHLNLLHPPNGTHAHATTGADTLLGSLCALGSGISYALWLIIQAKMIERYPSPYSSTALMSLWGSLLSIVFALCVERDWSQWRLGWNIRLLTAAYTGIVVSGVMVVVISWCVHMRGPLFVSVFSPLMLVMVALAGPTMLNEKLHLGCAIGTVLIVCGLYVVLWGKSKEMKKKNQLVPAQSPHDNESNTVEIVVRSAQEDKSNRNKTHEIVAKVGRDNNDSLADGHQEHCSCSHEQNQGNNGGEEENSNASHAQVFNI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0429 422 MobiDBLite consensus disorder prediction 396 422 - -
Gso15g0429 422 PANTHER WAT1-RELATED PROTEIN 12 365 - -
Gso15g0429 422 PANTHER WAT1-RELATED PROTEIN 12 365 IPR030184 GO:0016021|GO:0022857
Gso15g0429 422 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Gso15g0429 422 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Gso15g0429 422 MobiDBLite consensus disorder prediction 379 395 - -
Gso15g0429 422 MobiDBLite consensus disorder prediction 379 422 - -
Gso15g0429 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 145 - -
Gso15g0429 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0429 Gso-Chr15 3933544 3937390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0429 1 352 Nodulin-like Gene Family AT1G68170 46.591 5.10e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0429 - - gmx:100810649 700.279