Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0428 ATGGATATGTGTAACGTAGTGCATGCATTAAAACCAGTTATGCTAATGGTGCTGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTCGCGCTTAACGATGGCATGAACTTGAGTGTCATTGTTGCTTACCGTTATGTTTTTGCAACTGCTTTCATTGCTCCACTTGCTTTCATTCTTGAAAGGAAGACGAGGACAAAGATGACTTGGAGGATACTGTTTCAGGCATTTCTTTGCGGCTTAATTGGTGGAGTATTGCCTCAAAACTTAAACATGGAAGCGATTGCTTTAACTTCAGTAACGTTTACAACCGCCATATCCAACCTCATTCCAGCCATCACTTTTATCATATCCCTCTCCTTCGGATTGGAGAGATTAAATTTAAAAACAAAAGGAGGGAAAGCAAAGATAATTGGAACGATAACTGGAATTAGTGGGGCAATGATACTGACATTTATTAAAGGCCCAGAAGTTAAGATGTTGTCTTTCCATGTAAACCTTTTCAACCACCAAAACGGCCATGTCGTACATTCACACGCTTCTTCAGGCCTTATGACCATATTTGGTGCTCTCGCCTCTGTCGCAAGCAACGTCTCTTATGCCATGTGGCTTATCATTCAGGCAAAGATGAGTGAAAGATACCCGTGTCCTTATTCGAGCACAGCGTTGATGTCCCTAATGGGGGCACTCTTATCCATTTCATTTGCTTTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGGTTGGATTGGAATGTCAGACTATTGACTGTGGCTTATGCGGGTATAGTAGTTTCTGGAGTGATGGTAGCCGTGATTTCGTGGTGTGTACGCACGAGAGGTCCACTGTTTGTCTCCGTTTTTAGCCCTCTAATGCTTGTCGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAACTATACCTTGGAAGCTTTATTGGATCAATGTTAATTATTTGCGGATTATACGCGGTTCTTTGGGGTAAGAGCAAAGAGATGAAGAAGAATCAATCTGTTCCGCCAGAAAGCATCCATAAATCTGACACAGTTGAAATAATGGTCAAATCTCGCGTAGAAGATAAAAGCAACAATAAGAGCAATACCCTCGTTAATTCTGTAAATGCGACTGCGGATAATAAAGATTCATGGGAAAATAGATGTGAAAACAATGTAACACATATACACTGCTGCAAGGAGCGAGAAGAAGAAGTAACATCTCAGAATGGCTCACGTACCTAA 1245 0.4177 MDMCNVVHALKPVMLMVLVQVANAWVNVLYKLALNDGMNLSVIVAYRYVFATAFIAPLAFILERKTRTKMTWRILFQAFLCGLIGGVLPQNLNMEAIALTSVTFTTAISNLIPAITFIISLSFGLERLNLKTKGGKAKIIGTITGISGAMILTFIKGPEVKMLSFHVNLFNHQNGHVVHSHASSGLMTIFGALASVASNVSYAMWLIIQAKMSERYPCPYSSTALMSLMGALLSISFAFCVERDLSQWRLDWNVRLLTVAYAGIVVSGVMVAVISWCVRTRGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGSFIGSMLIICGLYAVLWGKSKEMKKNQSVPPESIHKSDTVEIMVKSRVEDKSNNKSNTLVNSVNATADNKDSWENRCENNVTHIHCCKEREEEVTSQNGSRT* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0428 414 PANTHER WAT1-RELATED PROTEIN 11 365 - -
Gso15g0428 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 152 - -
Gso15g0428 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 333 - -
Gso15g0428 414 PANTHER WAT1-RELATED PROTEIN 11 365 IPR030184 GO:0016021|GO:0022857
Gso15g0428 414 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Gso15g0428 414 Pfam EamA-like transporter family 11 152 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0428 Gso-Chr15 3918470 3924173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0428 3 336 Nodulin-like Gene Family AT1G68170 45.808 6.63e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0428 - - gmx:100810120 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1037 5 33403373 33407551 Gso15g0428 15 3918470 3924173 PCT
Gso8g0637 8 5870477 5879859 Gso15g0428 15 3918470 3924173 PCT