Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0424 ATGAGTAGGGAGATGAAATTTGAGGTGGAAAACAGAACATGCATAAAGCCCTCCACAGCCACAGCCACAGAACTGAAAACATTGAAACTCTCTTTACTAGACCAGCTTTCCCCTAACATCCATGGCAACATGACCCTCTTCTACCCTCACACCAACACTACTACTCTACCTGACTTCTCCACCAAATCCCAACTCCTTCAAACCTCCCTCTCCCAAACCTTGTCCCGCTTCTACCCCATCGCCGGACGCCTCCATGACGCCGCCACCGTCCACTGCAACGACCACGGCGCCCTCTTCATCGAATCCCTTACCAACGCCTCTCTCTCCGACATCCTCACACCCCCAAACTTCGACACCCTCCAATGTCTCCTCCCCTCCGCCGATACCTCCATGCTCCTCCTCGTCCGCTTCACCTCCTTCCGTTGCGGCGCCACCGCCCTCACCATCTCGCTCTCCCACAAGATCGCCGACATAGCTACCGTCATTGCACTCCTCAAAACCTGGACCGCCGCATGCGCCGGAGCCACCCCGCCGGAGCTCCCCGAACTCGCCCTCGGCGCCGCTCTCTTTCCTCCTAGAGAGATTAATCCCGGCATGTCCGCTTCCGTGAACACCGTGTCGTCGGAGAAGTTCACGTCGAGAAGGTTCGTTTTCGACGCGTCCAAGGTTAGAGAGCTTAAGGAAAAAGTAAAGGGCGCACTCGGAGAAGGAGAAGGTTCGGTGGTGTTTGAACCTTCGAGGGTGGAGGTGGTGCTGGCGCTCATATGGAAATGCGCATTGTCGGCTTCTCGCTCGAAAACGGCGGAGTTTAAGCGTTCTGTTTTGTTCCAAGCCGTGAACCTCCGTCCACGGATGGAGCCGGCGGTGCCGGACGTGGCTATGGGGAACTTTGTGTGGGCGTTGGCAGTGACGGCGGAGGAAGAGAGTGACGTGGAGTTGCACGTGCTGGTGAGGAGGATGAGGGAGGGAATGAGGGAGTTTGTGGAGACAAAGGCGGAGAGGTTCAAAGAGGATGGTGCGTTTGGAGTGGTGATGGAAAGTCTGAAGGAGAGGGGTGAAGTAATTAGCAATAGTGTTGTCGTTTATAAGTGCTCGAGTTGGTGTAAGTTTCCACTGCTTAAGGTTGACTTTGGTTGGGGGGAGGCTGTGTGGCTGTGCAGTGTGAATAAGATGGTGAGTAATACCATTGCCTTGATGGATACTAGGGATGGTCATGGGGTTGAAGCTTTTGTCACTCTTGATCATCAAGACATGACTTTTTTTGAACAACATCAGGAGCTCCTACACTATGCTTTGCTTAATCCTACTGTTATATAG 1317 0.5376 MSREMKFEVENRTCIKPSTATATELKTLKLSLLDQLSPNIHGNMTLFYPHTNTTTLPDFSTKSQLLQTSLSQTLSRFYPIAGRLHDAATVHCNDHGALFIESLTNASLSDILTPPNFDTLQCLLPSADTSMLLLVRFTSFRCGATALTISLSHKIADIATVIALLKTWTAACAGATPPELPELALGAALFPPREINPGMSASVNTVSSEKFTSRRFVFDASKVRELKEKVKGALGEGEGSVVFEPSRVEVVLALIWKCALSASRSKTAEFKRSVLFQAVNLRPRMEPAVPDVAMGNFVWALAVTAEEESDVELHVLVRRMREGMREFVETKAERFKEDGAFGVVMESLKERGEVISNSVVVYKCSSWCKFPLLKVDFGWGEAVWLCSVNKMVSNTIALMDTRDGHGVEAFVTLDHQDMTFFEQHQELLHYALLNPTVI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0424 438 Gene3D - 4 198 IPR023213 -
Gso15g0424 438 PANTHER VINORINE SYNTHASE-RELATED 4 438 - -
Gso15g0424 438 PANTHER F21J9.9 4 438 - -
Gso15g0424 438 Gene3D - 208 431 IPR023213 -
Gso15g0424 438 Pfam Transferase family 5 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0424 Gso-Chr15 3860390 3861860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0424 5 385 Monolignol Biosynthesis Gene Families AT5G48930 24.344 1.78e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0424 - - gmx:100808502 825.083