Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0419 ATGGAAGCTGAGCGGAAGCGCTTGAAGCCACGCCTTGAGCGTCGGAACGCTATGAAGAACATCGACTACCAATTGAAGGACGAGGACGCAGACGCAGACGCAGACGCAGCTTATTTGAATCAACGGAGTTTCCGAGTCAAAGGAATCGACGGCGAATTCGACCGCATCCTTCGCAGCCTGGGCCTCTCTGGGCCCGAGGACTTTGCCATCCCTGCTGCAGCCTGGGAAGAAGCCCGGGCCCATAAAGCCCGCAGCAGCGTCCAACCGAGAGAGGGGGGAATAAAGGGTGTTCGGCCTCCCGTTTTGGAACCGCCGTTGGTCACCTCTGCTTGGACCTCCCAACAACAAACGGAGAGGGTTCCACCTTCTGATTCTGTGTCACGTGATGACGATGTTGCTGTCGAAGCTCAAACTGAAGAGGTTTCTGGTTTTGCTGATGACCACGGGTCGTTTGATATTCATAATCTGTCCCCAAATGGAAGTGGGTATTTCCGGTCGTGGCAAAAGGGCGATATCCTAGGAAAAGGCTCCTTTGGAACCGTCTATGAAGGTTTCACCGATGATGGGAATTTTTTTGCTGTAAAGGAGGTGTCTTTGCTGGATGATGGAAGCCAGGGCAAACAGAGCCTTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCAGTTCCGACACGACAACATAGTCCGATATCTTGGCACTGACAAGGATGATGATAAGCTGTATATCTTCCTCGAGCTTGTAACAAAAGGATCATTGGCAAGTCTCTATCAAAAGTACCGTTTAAGGGACTCTCAAGTTTCTGCATACACACGACAGATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCCAATGGGTCCGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAGTTGAATGATGTTAAATCAAGTAAAGGCTCCCCGTACTGGATGGCCCCTGAGGTTGTTAACTTGAGGAACCGTGGATATGGACTAGCAGCTGATATATGGAGCTTGGGATGTACAGTTTTAGAGATGTTGACACGGCAACCTCCTTACTCTCACTTGGAAGGAATGCAAGCGTTATTTCGGATTGGCAGGGGTCAACCTCCACCTGTTCCAGAATCTTTGTCCACTGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAACAAACGGCCAACTGCTGCCCGGCTATTGGACCATCCATTTGTAAAGAGACCACTTCTATCTCCCATAAGTCCTGTTTCTCCAAGTATTAATCTTTTAATGTCGTAA 1323 0.4815 MEAERKRLKPRLERRNAMKNIDYQLKDEDADADADAAYLNQRSFRVKGIDGEFDRILRSLGLSGPEDFAIPAAAWEEARAHKARSSVQPREGGIKGVRPPVLEPPLVTSAWTSQQQTERVPPSDSVSRDDDVAVEAQTEEVSGFADDHGSFDIHNLSPNGSGYFRSWQKGDILGKGSFGTVYEGFTDDGNFFAVKEVSLLDDGSQGKQSLFQLQQEISLLSQFRHDNIVRYLGTDKDDDKLYIFLELVTKGSLASLYQKYRLRDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQPPPVPESLSTDARDFILKCLQVNPNKRPTAARLLDHPFVKRPLLSPISPVSPSINLLMS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0419 440 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 143 - -
Gso15g0419 440 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 91 422 - -
Gso15g0419 440 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 143 - -
Gso15g0419 440 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 91 422 - -
Gso15g0419 440 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Gso15g0419 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Gso15g0419 440 Gene3D Transferase(Phosphotransferase) domain 1 165 431 - -
Gso15g0419 440 SUPERFAMILY Protein kinase-like (PK-like) 165 431 IPR011009 -
Gso15g0419 440 MobiDBLite consensus disorder prediction 81 133 - -
Gso15g0419 440 Pfam Protein kinase domain 168 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0419 440 ProSiteProfiles Protein kinase domain profile. 167 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0419 440 SMART serkin_6 167 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0419 440 MobiDBLite consensus disorder prediction 107 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0419 Gso-Chr15 3825970 3830283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0419 11 86 MAP Kinase Kinase Kinase AT4G08500 44.318 1.91e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso15g0419 Pkinase 5.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0419 - K13414 gmx:100806902 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1049 5 33594148 33599759 Gso15g0419 15 3825970 3830283 PCT
Gso8g0649 8 5992066 5997504 Gso15g0419 15 3825970 3830283 PCT